RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PAN2Q504Q3 1202 aaKnown RBP15.18■□□□□ 0.02
TRAF4-214ENST00000580073 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-214ENST00000580073 ZNF710Q8N1W2 664 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 EFHBQ8N7U6 833 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 LINC01599Q8WXQ3 324 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 MFSD14AQ96MC6 490 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 PCYT2Q99447 389 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 KIF2CQ99661 725 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 ZSWIM6Q9HCJ5 1215 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 ZNF302Q9NR11 478 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 ZNF318Q5VUA4 2279 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 STXBP3O00186 592 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 MEIS1O00470 390 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 HOXA2O43364 376 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 ATG7O95352 703 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 RPS6KB1P23443 525 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 LTBRP36941 435 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 NFX1Q12986 1120 aaKnown RBP15.17■□□□□ 0.02
TRAF4-214ENST00000580073 PDE12Q6L8Q7 609 aaKnown RBP15.17■□□□□ 0.02
TRAF4-214ENST00000580073 PDXDC2PQ6P474 469 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 FAM167AQ96KS9 214 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 CDCA3Q99618 268 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-214ENST00000580073 IGFLR1Q9H665 355 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
TRAF4-214ENST00000580073 TBC1D22BQ9NU19 505 aa15.17■□□□□ 0.02
TRAF4-214ENST00000580073 IGKV6D-21A0A0A0MT36 114 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 ESYT2A0FGR8 921 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 DDX39AO00148 427 aaKnown RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 CSPG5O95196 566 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 EYA4O95677 639 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 ITGB1P05556 798 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 LAG3P18627 525 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 IRS1P35568 1242 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 CLK2P49760 499 aaKnown RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 COASYQ13057 564 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 CLUL1Q15846 466 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 PKN1Q16512 942 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 HERC4Q5GLZ8 1057 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 ZNF746Q6NUN9 644 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 TRAPPC12Q8WVT3 735 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-214ENST00000580073 PGBD1Q96JS3 809 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 GINS2Q9Y248 185 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 KMT2EQ8IZD2 1858 aa15.16■□□□□ 0.02
TRAF4-214ENST00000580073 KLF18A0A0U1RQI7 1052 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 IPO5O00410 1097 aaKnown RBP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 ARP10275 920 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 KLRC1P26715 233 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 GNA11P29992 359 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 ADAM15Q13444 863 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 TOB2Q14106 344 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 BLOC1S2Q6QNY1 142 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 ABHD15Q6UXT9 468 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 Q6ZUG5 572 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 SLC24A5Q71RS6 500 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 REXO1Q8N1G1 1221 aaKnown RBP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 SMRP1Q8NCR6 262 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 SPPL3Q8TCT6 385 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 TLR9Q9NR96 1032 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 RGS18Q9NS28 235 aa15.15■□□□□ 0.02
TRAF4-214ENST00000580073 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-214ENST00000580073 NID2Q14112 1375 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 MAGEB2O15479 319 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 PSAPP07602 524 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 CYP3A4P08684 503 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 TMOD1P28289 359 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 PPM1AP35813 382 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 CRYBB1P53674 252 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 AKAP17AQ02040 695 aaKnown RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 PFKFB3Q16875 520 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 CCDC60Q8IWA6 550 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 ABI1Q8IZP0 508 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 PRRX2Q99811 253 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 ADAM2Q99965 735 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 ZNF577Q9BSK1 485 aa15.14■□□□□ 0.01
TRAF4-214ENST00000580073 ELAC1Q9H777 363 aaKnown RBP15.14■□□□□ 0.01
TRAF4-214ENST00000580073 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms