RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 ACTN1P12814 892 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 MUTP22033 750 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 TMOD1P28289 359 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 TECP42680 631 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 CYP4A11Q02928 519 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 BECN1Q14457 450 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 PDIA5Q14554 519 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 GPNMBQ14956 572 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 RASIP1Q5U651 963 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 IER5Q5VY09 327 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ARL6IP4Q66PJ3 421 aaKnown RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 ZNF365Q70YC5 407 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ANO5Q75V66 913 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 TRMT1LQ7Z2T5 733 aaKnown RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 DEFB128Q7Z7B8 93 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 FERMT3Q86UX7 667 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ZNF710Q8N1W2 664 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 LINC01465Q8N7H1 131 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ERMNQ8TAM6 284 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 DNAJB3Q8WWF6 145 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 RNPC3Q96LT9 517 aaKnown RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 JPH2Q9BR39 696 aaPredicted RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 FAM49AQ9H0Q0 323 aaPredicted RBP11.24□□□□□ -0.61
MKS1-208ENST00000579358 TUFT1Q9NNX1 390 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 RGL1Q9NZL6 768 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 IGKV6-21A0A0C4DH24 114 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 BAIAP3O94812 1187 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 RPA1P27694 616 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 YWHABP31946 246 aaKnown RBP11.23□□□□□ -0.61
MKS1-208ENST00000579358 RFC5P40937 340 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
MKS1-208ENST00000579358 CTTNQ14247 550 aaKnown RBP11.23□□□□□ -0.61
MKS1-208ENST00000579358 MTERF2Q49AM1 385 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 CNKSR3Q6P9H4 555 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 DTHD1Q6ZMT9 781 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 TPH2Q8IWU9 490 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 KIAA0319LQ8IZA0 1049 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
MKS1-208ENST00000579358 CYP26B1Q9NR63 512 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 LRWD1Q9UFC0 647 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 CDY2AQ9Y6F7 541 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 SQORQ9Y6N5 450 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
MKS1-208ENST00000579358 GAS2O43903 313 aaKnown RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 EFCAB14O75071 495 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 MAFO75444 373 aaPredicted RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 CHRNA1P02708 482 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 SPATA31C1P0DKV0 1188 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
MKS1-208ENST00000579358 CLCN3P51790 818 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 PLEKHG4Q58EX7 1191 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 EFCAB12Q6NXP0 572 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 METTL13Q8N6R0 699 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 USP38Q8NB14 1042 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 APBB2Q92870 758 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 CEP170P1Q96L14 293 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 MAP7D2Q96T17 732 aa11.22□□□□□ -0.61
MKS1-208ENST00000579358 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 DHX33Q9H6R0 707 aaKnown RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
MKS1-208ENST00000579358 ABHD14A-ACY1A0A1B0GW23 586 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 MED24O75448 989 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
MKS1-208ENST00000579358 RARRES1P49788 294 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 DNM2P50570 870 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 NPEPPSP55786 919 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 CDC42EP1Q00587 391 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 IL17AQ16552 155 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 KRT79Q5XKE5 535 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 TSHZ1Q6ZSZ6 1077 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 SEPT8Q92599 483 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 AK8Q96MA6 479 aa11.21□□□□□ -0.61
MKS1-208ENST00000579358 DBR1Q9UK59 544 aaKnown RBP11.21□□□□□ -0.61
MKS1-208ENST00000579358 ZBBXA8MT70 800 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 SLC26A4O43511 780 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 DGAT1O75907 488 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 F13A1P00488 732 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms