RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 C5orf67F2Z3F1 127 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 CDKL5O76039 1030 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 RB1P06400 928 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 ATP4AP20648 1035 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 TMEM62Q0P6H9 643 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 GPM6BQ13491 265 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 ODR4Q5SWX8 454 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
SSH2-208ENST00000579040 ZNF689Q96CS4 500 aaPredicted RBP13.06□□□□□ -0.32
SSH2-208ENST00000579040 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 SAMM50Q9Y512 469 aa13.06□□□□□ -0.32
SSH2-208ENST00000579040 M0R2N6 131 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 MSH4O15457 936 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 MAGEB2O15479 319 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 GAS7O60861 476 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 DGKIO75912 1065 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 C22orf31O95567 290 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 SFNP31947 248 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 KCNQ1P51787 676 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 JAK3P52333 1124 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 ANAPC15P60006 121 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 Q4G0T1 1027 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 TBCKQ8TEA7 893 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 C11orf84Q9BUA3 381 aaPredicted RBP13.05□□□□□ -0.32
SSH2-208ENST00000579040 DISC1Q9NRI5 854 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
SSH2-208ENST00000579040 GABBR1Q9UBS5 961 aa13.05□□□□□ -0.32
SSH2-208ENST00000579040 CYP3A7-CYP3A51PA0A087WV96 503 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 EDIL3O43854 480 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 EIF5BO60841 1220 aaKnown RBP13.04□□□□□ -0.32
SSH2-208ENST00000579040 LINC00271P0C7V0 271 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 CYP3A7P24462 503 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 CTNNB1P35222 781 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 BMPR1AP36894 532 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 STK3Q13188 491 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
SSH2-208ENST00000579040 NPY5RQ15761 445 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
SSH2-208ENST00000579040 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
SSH2-208ENST00000579040 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 UBE2ZQ9H832 354 aaPredicted RBP13.04□□□□□ -0.32
SSH2-208ENST00000579040 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
SSH2-208ENST00000579040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
SSH2-208ENST00000579040 GPR182O15218 404 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 XBP1P17861 261 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 CRYBB1P53674 252 aaPredicted RBP13.03□□□□□ -0.32
SSH2-208ENST00000579040 PRKCEQ02156 737 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 NONOQ15233 471 aaKnown RBP eCLIP13.03□□□□□ -0.32
SSH2-208ENST00000579040 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 BANK1Q8NDB2 785 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 MBOAT7Q96N66 472 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
SSH2-208ENST00000579040 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
SSH2-208ENST00000579040 TMX1Q9H3N1 280 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
SSH2-208ENST00000579040 VCANP13611 3396 aa13.02□□□□□ -0.32
SSH2-208ENST00000579040 ZNF862O60290 1169 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 PFKFB2O60825 505 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 PSMD10O75832 226 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 OATP04181 439 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 TMOD1P28289 359 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
SSH2-208ENST00000579040 SCRN1Q12765 414 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.33
SSH2-208ENST00000579040 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 TMEM40Q8WWA1 233 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 P2RX5Q93086 422 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.33
SSH2-208ENST00000579040 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 LRFN2Q9ULH4 789 aa13.02□□□□□ -0.33
SSH2-208ENST00000579040 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms