RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ECM2O94769 699 aaPredicted RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 MYBP10242 640 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 EDNRBP24530 442 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 ZNF157P51786 506 aaPredicted RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 SPAG1Q07617 926 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 GOLGA8FQ08AF8 430 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 GOLGA8DPQ0D2H9 430 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 PADI6Q6TGC4 694 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 MYCT1Q8N699 235 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 ANKRD20A12PQ8NF67 263 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 BAG1Q99933 345 aaPredicted RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 MRPL44Q9H9J2 332 aaKnown RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 MAGEC2Q9UBF1 373 aaPredicted RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 COL4A3BPQ9Y5P4 624 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 N4BP3O15049 544 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 COPB1P53618 953 aaKnown RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 ACTR2P61160 394 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 FILIP1LQ4L180 1135 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 PLA2G4FQ68DD2 849 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 SWSAP1Q6NVH7 229 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 CCDC43Q96MW1 224 aaKnown RBP22.35■■□□□ 1.17
SMG8-203ENST00000578922 SLC45A1Q9Y2W3 748 aa22.35■■□□□ 1.17
SMG8-203ENST00000578922 NFASCO94856 1347 aa22.34■■□□□ 1.17
SMG8-203ENST00000578922 PES1O00541 588 aaKnown RBP22.34■■□□□ 1.17
SMG8-203ENST00000578922 TPM1P09493 284 aa22.34■■□□□ 1.17
SMG8-203ENST00000578922 PPP2R2CQ9Y2T4 447 aa22.34■■□□□ 1.17
SMG8-203ENST00000578922 DNAJC25-GNG10A0A024R161 153 aa22.33■■□□□ 1.17
SMG8-203ENST00000578922 USO1O60763 962 aaKnown RBP22.33■■□□□ 1.17
SMG8-203ENST00000578922 RARRES1P49788 294 aa22.33■■□□□ 1.17
SMG8-203ENST00000578922 NPEPPSP55786 919 aa22.33■■□□□ 1.17
SMG8-203ENST00000578922 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
SMG8-203ENST00000578922 SENP7Q9BQF6 1050 aa22.33■■□□□ 1.17
SMG8-203ENST00000578922 BACH1O14867 736 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 PRPF6O94906 941 aaKnown RBP22.33■■□□□ 1.16
SMG8-203ENST00000578922 UBA1P22314 1058 aaKnown RBP22.33■■□□□ 1.16
SMG8-203ENST00000578922 ICAM3P32942 547 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 CCNA1P78396 465 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 ERCC6LQ2NKX8 1250 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 C4orf19Q8IY42 314 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 SHCBP1Q8NEM2 672 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 NOC3LQ8WTT2 800 aaKnown RBP22.33■■□□□ 1.16
SMG8-203ENST00000578922 CNOT6LQ96LI5 555 aaKnown RBP22.33■■□□□ 1.16
SMG8-203ENST00000578922 TSG101Q99816 390 aa22.33■■□□□ 1.16
SMG8-203ENST00000578922 NKRFO15226 690 aaKnown RBP eCLIP22.32■■□□□ 1.16
SMG8-203ENST00000578922 HIP1RO75146 1068 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 GCNT3O95395 438 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 PSAPP07602 524 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 NMT1P30419 496 aaKnown RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 CCDC60Q8IWA6 550 aaPredicted RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 TC2NQ8N9U0 490 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 PARVGQ9HBI0 331 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 DBR1Q9UK59 544 aaKnown RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 LYPLA2O95372 231 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 EEF1GP26641 437 aaKnown RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 LRRC63Q05C16 580 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 BMS1Q14692 1282 aaKnown RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 LY6KQ17RY6 165 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 XKR9Q5GH70 373 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 RASAL3Q86YV0 1011 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 RDM1Q8NG50 284 aa22.32■■□□□ 1.16
SMG8-203ENST00000578922 PARK7Q99497 189 aaKnown RBP22.32■■□□□ 1.16
SMG8-203ENST00000578922 LRRC10BA6NIK2 292 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 ZNF862O60290 1169 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 GAP43P17677 238 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 GCLCP48506 637 aaPredicted RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 FAM193AP78312 1265 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.31■■□□□ 1.16
SMG8-203ENST00000578922 FBXO16Q8IX29 292 aaPredicted RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 UBXN4Q92575 508 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 ZNFX1Q9P2E3 1918 aaKnown RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 EFCAB8A8MWE9 144 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 B4DLN1 442 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 MTIF2P46199 727 aaKnown RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 KCNA1Q09470 495 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 ABHD15Q6UXT9 468 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 ANO5Q75V66 913 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 KSR1Q8IVT5 923 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 MNS1Q8NEH6 495 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 MPHOSPH6Q99547 160 aaKnown RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 ARGLU1Q9NWB6 273 aaPredicted RBP22.31■■□□□ 1.16
SMG8-203ENST00000578922 KCND2Q9NZV8 630 aa22.31■■□□□ 1.16
SMG8-203ENST00000578922 GUCY2CP25092 1073 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 ADORA2AP29274 412 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 ZCWPW2Q504Y3 356 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 ZC2HC1CQ53FD0 456 aaPredicted RBP22.3■■□□□ 1.16
SMG8-203ENST00000578922 ODR4Q5SWX8 454 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 MIS18BP1Q6P0N0 1132 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 DAW1Q8N136 415 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 TUBGCP2Q9BSJ2 902 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 KCTD10Q9H3F6 313 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 TRPM7Q96QT4 1865 aa22.3■■□□□ 1.16
SMG8-203ENST00000578922 MCM3APO60318 1980 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 ARIH2O95376 493 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 HOXD13P35453 343 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 UBXN1Q04323 297 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 MAPK7Q13164 816 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 EPM2AIP1Q7L775 607 aaPredicted RBP22.29■■□□□ 1.16
SMG8-203ENST00000578922 SAPCD2Q86UD0 394 aa22.29■■□□□ 1.16
SMG8-203ENST00000578922 FAM114A1Q8IWE2 563 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms