RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 RPA1P27694 616 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 YWHABP31946 246 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 MTERF2Q49AM1 385 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 UMODL1Q5DID0 1318 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZNF618Q5T7W0 954 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 KRT79Q5XKE5 535 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZNF710Q8N1W2 664 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 METTL13Q8N6R0 699 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 AK8Q96MA6 479 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 MAP7D2Q96T17 732 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 SCN5AQ14524 2016 aa14.27□□□□□ -0.12
TRAPPC1-206ENST00000573989 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 C22orf31O95567 290 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ACTN1P12814 892 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 CCT6AP40227 531 aaKnown RBP14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 DNM2P50570 870 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 TRIM71Q2Q1W2 868 aaKnown RBP14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 XKR9Q5GH70 373 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ATL3Q6DD88 541 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 RUFY4Q6ZNE9 571 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ANO5Q75V66 913 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 CATSPER3Q86XQ3 398 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 SLC7A3Q8WY07 619 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 SCLYQ96I15 445 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 CEP170P1Q96L14 293 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 NACC1Q96RE7 527 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 CYP26B1Q9NR63 512 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ANKEF1Q9NU02 776 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 ARID2Q68CP9 1835 aa14.27□□□□□ -0.13
TRAPPC1-206ENST00000573989 KDM3AQ9Y4C1 1321 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CTSHP09668 335 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 LONP1P36776 959 aaKnown RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 RFC5P40937 340 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CDC42EP1Q00587 391 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CEBPZQ03701 1054 aaKnown RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 TARBP2Q15633 366 aaKnown RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 WNT8BQ93098 351 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 CLIC4Q9Y696 253 aa14.26□□□□□ -0.13
TRAPPC1-206ENST00000573989 SLC26A4O43511 780 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 MAFO75444 373 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 MED24O75448 989 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 STBD1O95210 358 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 FGBP02675 491 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 SPATA31C1P0DKV0 1188 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 STK38Q15208 465 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 FAM173BQ6P4H8 233 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 DEFB128Q7Z7B8 93 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 WRAP73Q9P2S5 460 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 AKT3Q9Y243 479 aa14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 MORC2Q9Y6X9 1032 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC1-206ENST00000573989 DGAT1O75907 488 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 BRD1O95696 1058 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 ACRP10323 421 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 UBA7P41226 1012 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 NASPP49321 788 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 NUCB2P80303 420 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 SLC39A14Q15043 492 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 IL17AQ16552 155 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 ODR4Q5SWX8 454 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 KIAA0319LQ8IZA0 1049 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 USP38Q8NB14 1042 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 RASSF8Q8NHQ8 419 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 CALML4Q96GE6 196 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 USP28Q96RU2 1077 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 DBR1Q9UK59 544 aaKnown RBP14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 KIAA1024Q9UPX6 916 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 TRPV2Q9Y5S1 764 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 CDY2AQ9Y6F7 541 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 SQORQ9Y6N5 450 aa14.24□□□□□ -0.13
TRAPPC1-206ENST00000573989 TET1Q8NFU7 2136 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 TMEM150BA6NC51 233 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 EFCAB14O75071 495 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms