RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GTF3C6Q969F1 213 aa19.6■□□□□ 0.73
SMG6-212ENST00000573153 TGS1Q96RS0 853 aaKnown RBP19.6■□□□□ 0.73
SMG6-212ENST00000573153 CEP89Q96ST8 783 aa19.6■□□□□ 0.73
SMG6-212ENST00000573153 KIF2CQ99661 725 aa19.6■□□□□ 0.73
SMG6-212ENST00000573153 ZBED2Q9BTP6 218 aa19.6■□□□□ 0.73
SMG6-212ENST00000573153 CELF4Q9BZC1 486 aaKnown RBP19.6■□□□□ 0.73
SMG6-212ENST00000573153 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
SMG6-212ENST00000573153 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
SMG6-212ENST00000573153 MYH9P35579 1960 aaKnown RBP19.59■□□□□ 0.73
SMG6-212ENST00000573153 NLRC5Q86WI3 1866 aa19.59■□□□□ 0.73
SMG6-212ENST00000573153 C8orf34Q49A92 452 aa19.59■□□□□ 0.73
SMG6-212ENST00000573153 ZNF484Q5JVG2 852 aa19.59■□□□□ 0.73
SMG6-212ENST00000573153 RSPH3Q86UC2 560 aa19.59■□□□□ 0.73
SMG6-212ENST00000573153 BBXQ8WY36 941 aaPredicted RBP19.59■□□□□ 0.73
SMG6-212ENST00000573153 ZNF689Q96CS4 500 aaPredicted RBP19.59■□□□□ 0.73
SMG6-212ENST00000573153 GABBR1Q9UBS5 961 aa19.59■□□□□ 0.73
SMG6-212ENST00000573153 RALGAPA2Q2PPJ7 1873 aa19.58■□□□□ 0.73
SMG6-212ENST00000573153 EVPLQ92817 2033 aa19.58■□□□□ 0.73
SMG6-212ENST00000573153 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 RPLP2P05387 115 aaKnown RBP19.58■□□□□ 0.72
SMG6-212ENST00000573153 PSAPP07602 524 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 TARBP2Q15633 366 aaKnown RBP19.58■□□□□ 0.72
SMG6-212ENST00000573153 INF2Q27J81 1249 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.72
SMG6-212ENST00000573153 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
SMG6-212ENST00000573153 ERVK-5Q9HDB9 667 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 KCNMB3Q9NPA1 279 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 DISC1Q9NRI5 854 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 THEGQ9P2T0 379 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 MTUS1Q9ULD2 1270 aa19.58■□□□□ 0.72
SMG6-212ENST00000573153 TTC28Q96AY4 2481 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 WDR64B1ANS9 1081 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 MGEA5O60502 916 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 LRCH2Q5VUJ6 765 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 IER5Q5VY09 327 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 NME8Q8N427 588 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 VAV3Q9UKW4 847 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 PADI3Q9ULW8 664 aa19.57■□□□□ 0.72
SMG6-212ENST00000573153 KIAA1671Q9BY89 1806 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 JAK2O60674 1132 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 GPR32O75388 356 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 UPP2O95045 317 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 PRKCEQ02156 737 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 NONOQ15233 471 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMG6-212ENST00000573153 TMEM266Q2M3C6 531 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 ATXN2LQ8WWM7 1075 aaKnown RBP19.56■□□□□ 0.72
SMG6-212ENST00000573153 TEKT3Q9BXF9 490 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 TSPYL2Q9H2G4 693 aaPredicted RBP19.56■□□□□ 0.72
SMG6-212ENST00000573153 LMCD1Q9NZU5 365 aa19.56■□□□□ 0.72
SMG6-212ENST00000573153 NOC2LQ9Y3T9 749 aaKnown RBP19.56■□□□□ 0.72
SMG6-212ENST00000573153 EML1O00423 815 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 WNT7AO00755 349 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 GAS7O60861 476 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 OATP04181 439 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 EPC2Q52LR7 807 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 HAS1Q92839 578 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 ASB2Q96Q27 587 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 YME1L1Q96TA2 773 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 ADAMTS10Q9H324 1103 aa19.55■□□□□ 0.72
SMG6-212ENST00000573153 ORC3Q9UBD5 711 aaPredicted RBP19.55■□□□□ 0.72
SMG6-212ENST00000573153 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 TMEM150BA6NC51 233 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 CHMP2AO43633 222 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 DGKIO75912 1065 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 SFNP31947 248 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 CLCN3P51790 818 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 NEK4P51957 841 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 JAK3P52333 1124 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 TFF2Q03403 129 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 SPIRE1Q08AE8 756 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 NR5A1Q13285 461 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 PPP4R3AQ6IN85 833 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 FAM228AQ86W67 206 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 MICALL1Q8N3F8 863 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 RDM1Q8NG50 284 aa19.54■□□□□ 0.72
SMG6-212ENST00000573153 WRAP73Q9P2S5 460 aaPredicted RBP19.54■□□□□ 0.72
SMG6-212ENST00000573153 C5orf67F2Z3F1 127 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 VTNP04004 478 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 XBP1P17861 261 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 DRP2Q13474 957 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 DSC3Q14574 896 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 NEK8Q86SG6 692 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 WASF1Q92558 559 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 CLP1Q92989 425 aaKnown RBP19.53■□□□□ 0.72
SMG6-212ENST00000573153 FAM167AQ96KS9 214 aa19.53■□□□□ 0.72
SMG6-212ENST00000573153 DDX25Q9UHL0 483 aaKnown RBP19.53■□□□□ 0.72
SMG6-212ENST00000573153 IGKV6-21A0A0C4DH24 114 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 H3BNC9 293 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
SMG6-212ENST00000573153 PAK2Q13177 524 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 PPP2R5CQ13362 524 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 KIZQ2M2Z5 673 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 LETM2Q2VYF4 491 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 PIK3AP1Q6ZUJ8 805 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 TRMT1LQ7Z2T5 733 aaKnown RBP19.52■□□□□ 0.72
SMG6-212ENST00000573153 TMEM192Q8IY95 271 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 CKAP2LQ8IYA6 745 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 LRRC71Q8N4P6 559 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms