RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SZT2Q5T011 3432 aa23.23■■□□□ 1.31
CHMP6-204ENST00000572778 DDX11L8A8MPP1 907 aa23.22■■□□□ 1.31
CHMP6-204ENST00000572778 H3BQV1 296 aa23.22■■□□□ 1.31
CHMP6-204ENST00000572778 EFCAB14O75071 495 aa23.22■■□□□ 1.31
CHMP6-204ENST00000572778 P4HBP07237 508 aaKnown RBP23.22■■□□□ 1.31
CHMP6-204ENST00000572778 QARSP47897 775 aaKnown RBP23.22■■□□□ 1.31
CHMP6-204ENST00000572778 TTC38Q5R3I4 469 aa23.22■■□□□ 1.31
CHMP6-204ENST00000572778 PHOSPHO2Q8TCD6 241 aa23.22■■□□□ 1.31
CHMP6-204ENST00000572778 IFIH1Q9BYX4 1025 aaKnown RBP23.22■■□□□ 1.31
CHMP6-204ENST00000572778 TTC12Q9H892 705 aaPredicted RBP23.22■■□□□ 1.31
CHMP6-204ENST00000572778 MAGEB2O15479 319 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 DKC1O60832 514 aaKnown RBP eCLIP23.21■■□□□ 1.31
CHMP6-204ENST00000572778 U2AF2P26368 475 aaKnown RBP eCLIP23.21■■□□□ 1.31
CHMP6-204ENST00000572778 SPIRE1Q08AE8 756 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 LPIN1Q14693 890 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 MTERF2Q49AM1 385 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 FBXO47Q5MNV8 452 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 KIAA0319LQ8IZA0 1049 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 MTMR9Q96QG7 549 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 CELF4Q9BZC1 486 aaKnown RBP23.21■■□□□ 1.31
CHMP6-204ENST00000572778 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 SEMA6BQ9H3T3 888 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 MTMR10Q9NXD2 777 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 RGL1Q9NZL6 768 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 GINS2Q9Y248 185 aa23.21■■□□□ 1.31
CHMP6-204ENST00000572778 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 TRAPPC10P48553 1259 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 DEFB103AP81534 67 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 TBC1D8BQ0IIM8 1120 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 CUL4AQ13619 759 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 LARP1BQ659C4 914 aaKnown RBP23.2■■□□□ 1.3
CHMP6-204ENST00000572778 EFCAB12Q6NXP0 572 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 HERC6Q8IVU3 1022 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 APBB2Q92870 758 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 DYDC2Q96IM9 177 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 SH2D3AQ9BRG2 576 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 NIFKQ9BYG3 293 aaKnown RBP23.2■■□□□ 1.3
CHMP6-204ENST00000572778 NKX2-4Q9H2Z4 354 aa23.2■■□□□ 1.3
CHMP6-204ENST00000572778 TTYH1Q9H313 450 aaPredicted RBP23.2■■□□□ 1.3
CHMP6-204ENST00000572778 YBX2Q9Y2T7 364 aaKnown RBP23.2■■□□□ 1.3
CHMP6-204ENST00000572778 TMEM265A0A087WTH1 108 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 STBD1O95210 358 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 MYOGP15173 224 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 CLCN3P51790 818 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 CYP4A11Q02928 519 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 ORC2Q13416 577 aaPredicted RBP23.19■■□□□ 1.3
CHMP6-204ENST00000572778 NBR1Q14596 966 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
CHMP6-204ENST00000572778 TMCO2Q7Z6W1 182 aaPredicted RBP23.19■■□□□ 1.3
CHMP6-204ENST00000572778 LRRC71Q8N4P6 559 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 PPP1R16BQ96T49 567 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 LXNQ9BS40 222 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 SUGCTQ9HAC7 445 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
CHMP6-204ENST00000572778 KAT6AQ92794 2004 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 VTNP04004 478 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 TMOD1P28289 359 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 CTTNQ14247 550 aaKnown RBP23.18■■□□□ 1.3
CHMP6-204ENST00000572778 TARBP2Q15633 366 aaKnown RBP23.18■■□□□ 1.3
CHMP6-204ENST00000572778 TSHZ1Q6ZSZ6 1077 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 MAP7D2Q96T17 732 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 ZNF576Q9H609 170 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 WRAP73Q9P2S5 460 aaPredicted RBP23.18■■□□□ 1.3
CHMP6-204ENST00000572778 AKT3Q9Y243 479 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 TET1Q8NFU7 2136 aa23.18■■□□□ 1.3
CHMP6-204ENST00000572778 AMHP03971 560 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 OR52Z1P0C646 297 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 CD52P31358 61 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 KIZQ2M2Z5 673 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 PLA2G4FQ68DD2 849 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 FAM117BQ6P1L5 589 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 ANO5Q75V66 913 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 TPH2Q8IWU9 490 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 USP38Q8NB14 1042 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 EIF2AK1Q9BQI3 630 aaKnown RBP23.17■■□□□ 1.3
CHMP6-204ENST00000572778 ZSWIM4Q9H7M6 989 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 AGO3Q9H9G7 860 aaKnown RBP23.17■■□□□ 1.3
CHMP6-204ENST00000572778 SQORQ9Y6N5 450 aa23.17■■□□□ 1.3
CHMP6-204ENST00000572778 KDM3AQ9Y4C1 1321 aa23.16■■□□□ 1.3
CHMP6-204ENST00000572778 TLL1O43897 1013 aa23.16■■□□□ 1.3
CHMP6-204ENST00000572778 TOB1P50616 345 aaPredicted RBP23.16■■□□□ 1.3
CHMP6-204ENST00000572778 C4orf19Q8IY42 314 aa23.16■■□□□ 1.3
CHMP6-204ENST00000572778 MYOCDQ8IZQ8 938 aa23.16■■□□□ 1.3
CHMP6-204ENST00000572778 CDHR5Q9HBB8 845 aa23.16■■□□□ 1.3
CHMP6-204ENST00000572778 POTEMA6NI47 508 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 K7ELQ4 463 aaPredicted RBP23.15■■□□□ 1.3
CHMP6-204ENST00000572778 SLITRK3O94933 977 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 TECP42680 631 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 NPEPPSP55786 919 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 PAK2Q13177 524 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 MKRN4PQ13434 485 aaPredicted RBP23.15■■□□□ 1.3
CHMP6-204ENST00000572778 PPP2R2DQ66LE6 453 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 OTUD6AQ7L8S5 288 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 LINC01465Q8N7H1 131 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 CEP170P1Q96L14 293 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 GUCD1Q96NT3 240 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 CYP26B1Q9NR63 512 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 PADI3Q9ULW8 664 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms