RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PPP1R18Q6NYC8 613 aa21.65■■□□□ 1.06
SCARF1-204ENST00000570902 ERVK-5Q9HDB9 667 aa21.65■■□□□ 1.06
SCARF1-204ENST00000570902 RIC8AQ9NPQ8 531 aa21.65■■□□□ 1.06
SCARF1-204ENST00000570902 RGS18Q9NS28 235 aa21.65■■□□□ 1.06
SCARF1-204ENST00000570902 GINS2Q9Y248 185 aa21.65■■□□□ 1.06
SCARF1-204ENST00000570902 COL1A2P08123 1366 aa21.64■■□□□ 1.06
SCARF1-204ENST00000570902 IGKV6D-21A0A0A0MT36 114 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 TBKBP1A7MCY6 615 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 GPR182O15218 404 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 ARP10275 920 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 ITGB3BPQ13352 177 aaPredicted RBP21.64■■□□□ 1.05
SCARF1-204ENST00000570902 SYNE3Q6ZMZ3 975 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 SLC24A5Q71RS6 500 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 MICU3Q86XE3 530 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 RAB11FIP4Q86YS3 637 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 PRSS33Q8NF86 280 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 NEK1Q96PY6 1258 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 ADAM2Q99965 735 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 PCDHGC5Q9Y5F6 944 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 LOXHD1Q8IVV2 1947 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 PLXNA4Q9HCM2 1894 aa21.64■■□□□ 1.05
SCARF1-204ENST00000570902 BACH1O14867 736 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 FGF18O76093 207 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 NAPAP54920 295 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 SIGLEC14Q08ET2 396 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 DUSP6Q16828 381 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 SGMS1Q86VZ5 419 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 THNSL1Q8IYQ7 743 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 FBXL6Q8N531 539 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 ATP8B4Q8TF62 1192 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 RPGRIP1Q96KN7 1286 aa21.63■■□□□ 1.05
SCARF1-204ENST00000570902 NOC2LQ9Y3T9 749 aaKnown RBP21.63■■□□□ 1.05
SCARF1-204ENST00000570902 MEIS1O00470 390 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 PER2O15055 1255 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 MGEA5O60502 916 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 ADCY7P51828 1080 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 ZNF484Q5JVG2 852 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 IER5LQ5T953 404 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 NIPA1Q7RTP0 329 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 KIAA0319LQ8IZA0 1049 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 SUSD6Q92537 303 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 ANO3Q9BYT9 981 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 GLT8D2Q9H1C3 349 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 RBM28Q9NW13 759 aaKnown RBP21.62■■□□□ 1.05
SCARF1-204ENST00000570902 TMEM260Q9NX78 707 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 ST3GAL5Q9UNP4 418 aa21.62■■□□□ 1.05
SCARF1-204ENST00000570902 C9IYK1 514 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 hCG_1984214I3L0E3 225 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 SLC27A2O14975 620 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 LAG3P18627 525 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 ZNF76P36508 570 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 AP3B2Q13367 1082 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 FAM102BQ5T8I3 360 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 ABHD15Q6UXT9 468 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 ZNF713Q8N859 430 aaPredicted RBP21.61■■□□□ 1.05
SCARF1-204ENST00000570902 COLGALT1Q8NBJ5 622 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 TMEM40Q8WWA1 233 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 PGBD1Q96JS3 809 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 LSG1Q9H089 658 aaKnown RBP21.61■■□□□ 1.05
SCARF1-204ENST00000570902 ATP6V0A4Q9HBG4 840 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 ZNF302Q9NR11 478 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 TYW1Q9NV66 732 aaKnown RBP21.61■■□□□ 1.05
SCARF1-204ENST00000570902 TMEM161AQ9NX61 479 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 LZTS1Q9Y250 596 aa21.61■■□□□ 1.05
SCARF1-204ENST00000570902 FNDC1Q4ZHG4 1894 aaPredicted RBP21.6■■□□□ 1.05
SCARF1-204ENST00000570902 CNTNAP5Q8WYK1 1306 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 FSCN2O14926 492 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 CCNE2O96020 404 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 SREBF1P36956 1147 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 CRYBB1P53674 252 aaPredicted RBP21.6■■□□□ 1.05
SCARF1-204ENST00000570902 MIS18BP1Q6P0N0 1132 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 PDXDC2PQ6P474 469 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 TMEM184AQ6ZMB5 413 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 VN1R2Q8NFZ6 395 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 LRRC2Q9BYS8 371 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 ELAC1Q9H777 363 aaKnown RBP21.6■■□□□ 1.05
SCARF1-204ENST00000570902 CDHR5Q9HBB8 845 aa21.6■■□□□ 1.05
SCARF1-204ENST00000570902 PUF60Q9UHX1 559 aaKnown RBP21.6■■□□□ 1.05
SCARF1-204ENST00000570902 DDX39AO00148 427 aaKnown RBP21.59■■□□□ 1.05
SCARF1-204ENST00000570902 ERVFC1P60507 584 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 FAM189BP81408 668 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 PLCB3Q01970 1234 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 CREB3L3Q68CJ9 461 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 TYW1BQ6NUM6 668 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 CCDC60Q8IWA6 550 aaPredicted RBP21.59■■□□□ 1.05
SCARF1-204ENST00000570902 RASGRP4Q8TDF6 673 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 PHOX2BQ99453 314 aa21.59■■□□□ 1.05
SCARF1-204ENST00000570902 SMCO2A6NFE2 343 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 HOXA2O43364 376 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 RBM10P98175 930 aaKnown RBP21.58■■□□□ 1.05
SCARF1-204ENST00000570902 COL9A3Q14050 684 aaPredicted RBP21.58■■□□□ 1.05
SCARF1-204ENST00000570902 NECTIN1Q15223 517 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 PTPN21Q16825 1174 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 KIZQ2M2Z5 673 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 MRPS27Q92552 414 aaKnown RBP21.58■■□□□ 1.05
SCARF1-204ENST00000570902 OSMRQ99650 979 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 IRF2BPLQ9H1B7 796 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 CWH43Q9H720 699 aa21.58■■□□□ 1.05
SCARF1-204ENST00000570902 NGRNQ9NPE2 291 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms