RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 SPATS2LQ9NUQ6 558 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 INTUQ9ULD6 942 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 STXBP5LQ9Y2K9 1186 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 DIS3Q9Y2L1 958 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 H2AFZP0C0S5 128 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 CCNHP51946 323 aaPredicted RBP16.75■□□□□ 0.27
SMG6-207ENST00000570756 MECOMQ03112 1051 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 C6orf118Q5T5N4 469 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 H2AFVQ71UI9 128 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 PANK4Q9NVE7 773 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 L3MBTL1Q9Y468 752 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 LIN7AO14910 233 aaPredicted RBP16.75■□□□□ 0.27
SMG6-207ENST00000570756 PDE6CP51160 858 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 PTENP60484 403 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 DR1Q01658 176 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 POU5F1Q01860 360 aaKnown RBP16.75■□□□□ 0.27
SMG6-207ENST00000570756 ADCY2Q08462 1091 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 CLUL1Q15846 466 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 PTPROQ16827 1216 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 ZNF772Q68DY9 489 aaPredicted RBP16.75■□□□□ 0.27
SMG6-207ENST00000570756 NT5DC3Q86UY8 548 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 HES6Q96HZ4 224 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 TRIM31Q9BZY9 425 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 SEC63Q9UGP8 760 aaKnown RBP16.75■□□□□ 0.27
SMG6-207ENST00000570756 AMFRQ9UKV5 643 aa16.75■□□□□ 0.27
SMG6-207ENST00000570756 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 FGGP02679 453 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 PRKCIP41743 596 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
SMG6-207ENST00000570756 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 CAPRIN2Q6IMN6 1127 aaKnown RBP16.74■□□□□ 0.27
SMG6-207ENST00000570756 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
SMG6-207ENST00000570756 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
SMG6-207ENST00000570756 ERP44Q9BS26 406 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 ADAM7Q9H2U9 754 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 KCNMB3Q9NPA1 279 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 HOMER3Q9NSC5 361 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 FAM187AA6NFU0 413 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 LRRC4CQ9HCJ2 640 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 RASAL2Q9UJF2 1139 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
SMG6-207ENST00000570756 TLDC2A0PJX2 215 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 KCNQ2O43526 872 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 SKAP2O75563 359 aaPredicted RBP16.73■□□□□ 0.27
SMG6-207ENST00000570756 LUC7L3O95232 432 aaKnown RBP16.73■□□□□ 0.27
SMG6-207ENST00000570756 SHBGP04278 402 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 UCHL3P15374 230 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 GBP1P32455 592 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 DUPD1Q68J44 220 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 TAOK1Q7L7X3 1001 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 ZNF483Q8TF39 744 aaPredicted RBP16.73■□□□□ 0.27
SMG6-207ENST00000570756 DNAJC19Q96DA6 116 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 AZI2Q9H6S1 392 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 ZDHHC18Q9NUE0 388 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 CNOT7Q9UIV1 285 aaKnown RBP16.73■□□□□ 0.27
SMG6-207ENST00000570756 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
SMG6-207ENST00000570756 POTEMA6NI47 508 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 CETN3O15182 167 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 ADAM9Q13443 819 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 DHX34Q14147 1143 aaKnown RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 EPB41L4BQ9H329 900 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 ABCF3Q9NUQ8 709 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 STX8Q9UNK0 236 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 THSD7AQ9UPZ6 1657 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 ESYT2A0FGR8 921 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 SNX3O60493 162 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 DIAPH2O60879 1101 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 UBOX5O94941 541 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 ALDH5A1P51649 535 aaPredicted RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 DRG2P55039 364 aaKnown RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 NCALDP61601 193 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 CDCA2Q69YH5 1023 aaPredicted RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 CDCA7Q9BWT1 371 aaPredicted RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
SMG6-207ENST00000570756 USP15Q9Y4E8 981 aaPredicted RBP16.72■□□□□ 0.27
SMG6-207ENST00000570756 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 SUN1O94901 812 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 USP17L8P0C7I0 530 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms