RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 C22orf31O95567 290 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 JAK3P52333 1124 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 FBXO22Q8NEZ5 403 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LINC01599Q8WXQ3 324 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ZNF689Q96CS4 500 aaPredicted RBP19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 C17orf80Q9BSJ5 609 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PHF20Q9BVI0 1012 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TPCN1Q9ULQ1 816 aa19.33■□□□□ 0.68
MAP1LC3B-208ENST00000570189 H3BNC9 293 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PSMD10O75832 226 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LINC00271P0C7V0 271 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CD52P31358 61 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 STK3Q13188 491 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 EPC2Q52LR7 807 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 KRT40Q6A162 431 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 KRT25Q7Z3Z0 450 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CLP1Q92989 425 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 SLKQ9H2G2 1235 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 DISC1Q9NRI5 854 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 RWDD3Q9Y3V2 267 aa19.32■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ADGRA3Q8IWK6 1321 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 FNDC1Q4ZHG4 1894 aaPredicted RBP19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 RBAK-RBAKDNI3L0D1 243 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 MAGEB2O15479 319 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 GAS7O60861 476 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 NONOQ15233 471 aaKnown RBP eCLIP19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ODR4Q5SWX8 454 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TMEM192Q8IY95 271 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 MICALL1Q8N3F8 863 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LINC01465Q8N7H1 131 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 AIFM3Q96NN9 605 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LARP6Q9BRS8 491 aaKnown RBP19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TEKT3Q9BXF9 490 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 GABBR1Q9UBS5 961 aa19.31■□□□□ 0.68
MAP1LC3B-208ENST00000570189 DGKIO75912 1065 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 UPP2O95045 317 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 RB1P06400 928 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 XBP1P17861 261 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PAK2Q13177 524 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 RTN4RL1Q86UN2 441 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 NPAS4Q8IUM7 802 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ETNPPLQ8TBG4 499 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 MRPL38Q96DV4 380 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 MTUS1Q9ULD2 1270 aa19.3■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ZNF862O60290 1169 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CTDNEP1O95476 244 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 OATP04181 439 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 BMP1P13497 986 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 AK2P54819 239 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TMEM62Q0P6H9 643 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PPP4R3AQ6IN85 833 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CKAP2LQ8IYA6 745 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 FIBCD1Q8N539 461 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 HLA-CQ95604 372 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TMX1Q9H3N1 280 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 UNC45AQ9H3U1 944 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ERVK-5Q9HDB9 667 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 SAMM50Q9Y512 469 aa19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TCF20Q9UGU0 1960 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3B-208ENST00000570189 GPR32O75388 356 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TDP2O95551 362 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 GCFC2P16383 781 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CRYBB1P53674 252 aaPredicted RBP19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PTPROQ16827 1216 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 CMTR2Q8IYT2 770 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 WASF1Q92558 559 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 UIMC1Q96RL1 719 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PLVAPQ9BX97 442 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 LMAN2LQ9H0V9 348 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 NRBP2Q9NSY0 501 aa19.28■□□□□ 0.68
MAP1LC3B-208ENST00000570189 STAG3L1P0CL83 205 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 BMPR1AP36894 532 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PRKCEQ02156 737 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 COL19A1Q14993 1142 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TARBP2Q15633 366 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TIGD5Q53EQ6 642 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 ADAMTS19Q8TE59 1207 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 TMEM40Q8WWA1 233 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 GTF3C6Q969F1 213 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 FAM20AQ96MK3 541 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 NAP1L4Q99733 375 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 NIFKQ9BYG3 293 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 KCNMB3Q9NPA1 279 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 C1orf112Q9NSG2 853 aa19.27■□□□□ 0.68
MAP1LC3B-208ENST00000570189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TNFRSF10AO00220 468 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TBX3O15119 743 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GPR182O15218 404 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 RPS6KA5O75582 802 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TMOD1P28289 359 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 SARSP49591 514 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TFF2Q03403 129 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GPM6BQ13491 265 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 SKIV2LQ15477 1246 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 INF2Q27J81 1249 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms