RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FAM205CA6NFA0 338 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 WDR64B1ANS9 1081 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 STBD1O95210 358 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 PSAPP07602 524 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 KLRC1P26715 233 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 CD52P31358 61 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 TMEM62Q0P6H9 643 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 ANKRD1Q15327 319 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 INF2Q27J81 1249 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 EARS2Q5JPH6 523 aaKnown RBP8.85□□□□□ -0.99
CDH3-209ENST00000569080 ZNF484Q5JVG2 852 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 LRCH2Q5VUJ6 765 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 KRT25Q7Z3Z0 450 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 NECAB1Q8N987 351 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 NSUN7Q8NE18 718 aaKnown RBP8.85□□□□□ -0.99
CDH3-209ENST00000569080 BBXQ8WY36 941 aaPredicted RBP8.85□□□□□ -0.99
CDH3-209ENST00000569080 TGS1Q96RS0 853 aaKnown RBP8.85□□□□□ -0.99
CDH3-209ENST00000569080 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 KIF2CQ99661 725 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 CELF4Q9BZC1 486 aaKnown RBP8.85□□□□□ -0.99
CDH3-209ENST00000569080 C22orf23Q9BZE7 217 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 TMX1Q9H3N1 280 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 ERVK-5Q9HDB9 667 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 KCNMB3Q9NPA1 279 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 DISC1Q9NRI5 854 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 THEGQ9P2T0 379 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 GABBR1Q9UBS5 961 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 VAV3Q9UKW4 847 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 MTUS1Q9ULD2 1270 aa8.85□□□□□ -0.99
CDH3-209ENST00000569080 BDP1A6H8Y1 2624 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 ADGRA3Q8IWK6 1321 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 ENPP3O14638 875 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 CHMP2AO43633 222 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 JAK2O60674 1132 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 GAS7O60861 476 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 OATP04181 439 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 SFNP31947 248 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 JAK3P52333 1124 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 PRKCEQ02156 737 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 NONOQ15233 471 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH3-209ENST00000569080 TARBP2Q15633 366 aaKnown RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 CCDC85BQ15834 202 aaPredicted RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 IER5Q5VY09 327 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 RTN4RL1Q86UN2 441 aaPredicted RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 NME8Q8N427 588 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 PPM1EQ8WY54 764 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 TNPO1Q92973 898 aaKnown RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 YME1L1Q96TA2 773 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 TEKT3Q9BXF9 490 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
CDH3-209ENST00000569080 PADI3Q9ULW8 664 aa8.84□□□□□ -0.99
CDH3-209ENST00000569080 FNDC1Q4ZHG4 1894 aaPredicted RBP8.83□□□□□ -1
CDH3-209ENST00000569080 TMEM150BA6NC51 233 aa8.83□□□□□ -1
CDH3-209ENST00000569080 WNT7AO00755 349 aa8.83□□□□□ -1
CDH3-209ENST00000569080 MGEA5O60502 916 aa8.83□□□□□ -1
CDH3-209ENST00000569080 GPR32O75388 356 aa8.83□□□□□ -1
CDH3-209ENST00000569080 UPP2O95045 317 aa8.83□□□□□ -1
CDH3-209ENST00000569080 CLCN3P51790 818 aa8.83□□□□□ -1
CDH3-209ENST00000569080 NEK4P51957 841 aa8.83□□□□□ -1
CDH3-209ENST00000569080 SPIRE1Q08AE8 756 aa8.83□□□□□ -1
CDH3-209ENST00000569080 PAK2Q13177 524 aa8.83□□□□□ -1
CDH3-209ENST00000569080 NR5A1Q13285 461 aa8.83□□□□□ -1
CDH3-209ENST00000569080 PPP2R5CQ13362 524 aa8.83□□□□□ -1
CDH3-209ENST00000569080 TMEM266Q2M3C6 531 aa8.83□□□□□ -1
CDH3-209ENST00000569080 EPC2Q52LR7 807 aa8.83□□□□□ -1
CDH3-209ENST00000569080 TJAP1Q5JTD0 557 aa8.83□□□□□ -1
CDH3-209ENST00000569080 PPP4R3AQ6IN85 833 aa8.83□□□□□ -1
CDH3-209ENST00000569080 NEK8Q86SG6 692 aa8.83□□□□□ -1
CDH3-209ENST00000569080 FAM228AQ86W67 206 aa8.83□□□□□ -1
CDH3-209ENST00000569080 CKAP2LQ8IYA6 745 aa8.83□□□□□ -1
CDH3-209ENST00000569080 MICALL1Q8N3F8 863 aa8.83□□□□□ -1
CDH3-209ENST00000569080 ATXN2LQ8WWM7 1075 aaKnown RBP8.83□□□□□ -1
CDH3-209ENST00000569080 HAS1Q92839 578 aa8.83□□□□□ -1
CDH3-209ENST00000569080 CLP1Q92989 425 aaKnown RBP8.83□□□□□ -1
CDH3-209ENST00000569080 FAM167AQ96KS9 214 aa8.83□□□□□ -1
CDH3-209ENST00000569080 FTHL17Q9BXU8 183 aa8.83□□□□□ -1
CDH3-209ENST00000569080 CEP131Q9UPN4 1083 aa8.83□□□□□ -1
CDH3-209ENST00000569080 NOC2LQ9Y3T9 749 aaKnown RBP8.83□□□□□ -1
CDH3-209ENST00000569080 SAMM50Q9Y512 469 aa8.83□□□□□ -1
CDH3-209ENST00000569080 C5orf42Q9H799 3197 aa8.83□□□□□ -1
CDH3-209ENST00000569080 NCOR1O75376 2440 aa8.82□□□□□ -1
CDH3-209ENST00000569080 CCDC194A0A1B0GVG4 234 aa8.82□□□□□ -1
CDH3-209ENST00000569080 C5orf67F2Z3F1 127 aa8.82□□□□□ -1
CDH3-209ENST00000569080 M0QZ92 97 aa8.82□□□□□ -1
CDH3-209ENST00000569080 EML1O00423 815 aa8.82□□□□□ -1
CDH3-209ENST00000569080 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
CDH3-209ENST00000569080 DGKIO75912 1065 aa8.82□□□□□ -1
CDH3-209ENST00000569080 VTNP04004 478 aa8.82□□□□□ -1
CDH3-209ENST00000569080 GCFC2P16383 781 aaKnown RBP8.82□□□□□ -1
CDH3-209ENST00000569080 TFF2Q03403 129 aa8.82□□□□□ -1
CDH3-209ENST00000569080 DRP2Q13474 957 aa8.82□□□□□ -1
CDH3-209ENST00000569080 KIZQ2M2Z5 673 aa8.82□□□□□ -1
CDH3-209ENST00000569080 LETM2Q2VYF4 491 aa8.82□□□□□ -1
CDH3-209ENST00000569080 PIK3AP1Q6ZUJ8 805 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms