RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TBC1D22BQ9NU19 505 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 TCEAL9Q9UHQ7 104 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 GINS2Q9Y248 185 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 IGLV3-22A0A075B6J6 115 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 IPO5O00410 1097 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 RPS6KA5O75582 802 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 ALADP13716 330 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 CPA1P15085 419 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 PAN2Q504Q3 1202 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 SWSAP1Q6NVH7 229 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 BLOC1S2Q6QNY1 142 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 CKAP2LQ8IYA6 745 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 REXO1Q8N1G1 1221 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 CRIPAKQ8N1N5 446 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 CRYGNQ8WXF5 182 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 BBXQ8WY36 941 aaPredicted RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 BRF1Q92994 677 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 PPP2R3CQ969Q6 453 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 JAKMIP1Q96N16 626 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 PRKAG3Q9UGI9 489 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 PLAGL2Q9UPG8 496 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 PCDHB7Q9Y5E2 793 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
CNOT1-215ENST00000569020 BDP1A6H8Y1 2624 aa15.51■□□□□ 0.07
CNOT1-215ENST00000569020 FAM86C2PA6NEL3 165 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 DHX15O43143 795 aaKnown RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 PRPF3O43395 683 aaKnown RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 CSPG5O95196 566 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 HSPA4P34932 840 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 SARSP49591 514 aaKnown RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 HYAL1Q12794 435 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 TMEM266Q2M3C6 531 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 CTC1Q2NKJ3 1217 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 ZNF746Q6NUN9 644 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 SMAP1Q8IYB5 467 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 IGFLR1Q9H665 355 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 C11orf16Q9NQ32 467 aa15.5■□□□□ 0.07
CNOT1-215ENST00000569020 ARIH1Q9Y4X5 557 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-215ENST00000569020 NID2Q14112 1375 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 GPR182O15218 404 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 PSAPP07602 524 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 IBSPP21815 317 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-215ENST00000569020 LTBRP36941 435 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 PKN1Q16512 942 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 KIAA0319LQ8IZA0 1049 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 CCDC148Q8NFR7 591 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 BICD2Q8TD16 824 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 KCNB2Q92953 911 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 UIMC1Q96RL1 719 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 TMX1Q9H3N1 280 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 ERVK-5Q9HDB9 667 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 C1orf112Q9NSG2 853 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
CNOT1-215ENST00000569020 SAMM50Q9Y512 469 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 MAFBQ9Y5Q3 323 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-215ENST00000569020 SNX14Q9Y5W7 946 aa15.49■□□□□ 0.07
CNOT1-215ENST00000569020 PRR33A8MZF0 331 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 ITGB1P05556 798 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 ATP4AP20648 1035 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 PSMA5P28066 241 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 CAMK1Q14012 370 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 PRR16Q569H4 304 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 TRMT1LQ7Z2T5 733 aaKnown RBP15.48■□□□□ 0.07
CNOT1-215ENST00000569020 ADHFE1Q8IWW8 467 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 FBXL16Q8N461 479 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 KLHL23Q8NBE8 558 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 SPPL3Q8TCT6 385 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 POF1BQ8WVV4 589 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 TMEM40Q8WWA1 233 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 PHKBQ93100 1093 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 RNF26Q9BY78 433 aaPredicted RBP15.48■□□□□ 0.07
CNOT1-215ENST00000569020 CDHR5Q9HBB8 845 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 RGS18Q9NS28 235 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 ST3GAL5Q9UNP4 418 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 PCDHA10Q9Y5I2 948 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
CNOT1-215ENST00000569020 ZBTB42B2RXF5 422 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 MBTPS2O43462 519 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 C22orf31O95567 290 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 CIITAP33076 1130 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.078e-10■■■■□ 19.3
CNOT1-215ENST00000569020 GATMP50440 423 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 CRYBB1P53674 252 aaPredicted RBP15.47■□□□□ 0.07
CNOT1-215ENST00000569020 ZP2Q05996 745 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 DLX2Q07687 328 aaPredicted RBP15.47■□□□□ 0.07
CNOT1-215ENST00000569020 ADAM15Q13444 863 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 SMAD2Q15796 467 aaKnown RBP15.47■□□□□ 0.07
CNOT1-215ENST00000569020 CLUL1Q15846 466 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 CSPP1Q1MSJ5 1256 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
CNOT1-215ENST00000569020 SLC24A5Q71RS6 500 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 METTL13Q8N6R0 699 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 PPP1R16BQ96T49 567 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 OSMRQ99650 979 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 ADAM2Q99965 735 aa15.47■□□□□ 0.07
CNOT1-215ENST00000569020 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms