RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 LINC01553A4QN01 128 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 SLC37A4O43826 429 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 UPP2O95045 317 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 CCDC85BQ15834 202 aaPredicted RBP20.47■□□□□ 0.87
SIN3A-212ENST00000568919 PPP4R3AQ6IN85 833 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 MIER3Q7Z3K6 550 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 CDHR5Q9HBB8 845 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 KDM3AQ9Y4C1 1321 aa20.47■□□□□ 0.87
SIN3A-212ENST00000568919 EYSQ5T1H1 3165 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 CCNT1O60563 726 aaKnown RBP20.46■□□□□ 0.87
SIN3A-212ENST00000568919 C22orf31O95567 290 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 CD52P31358 61 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 KRT2P35908 639 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 NR5A1Q13285 461 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 UGCGQ16739 394 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 RTN4RL1Q86UN2 441 aaPredicted RBP20.46■□□□□ 0.87
SIN3A-212ENST00000568919 RDM1Q8NG50 284 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 FAM167AQ96KS9 214 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 CEP131Q9UPN4 1083 aa20.46■□□□□ 0.87
SIN3A-212ENST00000568919 OATP04181 439 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
SIN3A-212ENST00000568919 POU3F3P20264 500 aaPredicted RBP20.45■□□□□ 0.86
SIN3A-212ENST00000568919 ERVK-21P61565 698 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 SP7Q8TDD2 431 aaPredicted RBP20.45■□□□□ 0.86
SIN3A-212ENST00000568919 TNFRSF25Q93038 417 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 FAM20AQ96MK3 541 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 TGS1Q96RS0 853 aaKnown RBP20.45■□□□□ 0.86
SIN3A-212ENST00000568919 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 KCNMB3Q9NPA1 279 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 PADI3Q9ULW8 664 aa20.45■□□□□ 0.86
SIN3A-212ENST00000568919 FAM205CA6NFA0 338 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 MAGEB2O15479 319 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 MMP1P03956 469 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 PRKCEQ02156 737 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 YME1L1Q96TA2 773 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 NAP1L4Q99733 375 aaKnown RBP20.44■□□□□ 0.86
SIN3A-212ENST00000568919 GINS2Q9Y248 185 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
SIN3A-212ENST00000568919 PRUNE2Q8WUY3 3088 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 STBD1O95210 358 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
SIN3A-212ENST00000568919 FOSBP53539 338 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 GRB10Q13322 594 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 TRIM29Q14134 588 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 KRT40Q6A162 431 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 EFCAB12Q6NXP0 572 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 HAS1Q92839 578 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
SIN3A-212ENST00000568919 SUGCTQ9HAC7 445 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 PRDM6Q9NQX0 595 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 MTUS1Q9ULD2 1270 aa20.43■□□□□ 0.86
SIN3A-212ENST00000568919 EML1O00423 815 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 TBX3O15119 743 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 GTPBP6O43824 516 aaPredicted RBP20.42■□□□□ 0.86
SIN3A-212ENST00000568919 LPXNO60711 386 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 GPR32O75388 356 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 VTNP04004 478 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 PAK2Q13177 524 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 PPP2R5CQ13362 524 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 TARBP2Q15633 366 aaKnown RBP20.42■□□□□ 0.86
SIN3A-212ENST00000568919 TMEM266Q2M3C6 531 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 XKR3Q5GH77 459 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 LINC01465Q8N7H1 131 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 LINC01599Q8WXQ3 324 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 LLPHQ9BRT6 129 aaKnown RBP20.42■□□□□ 0.86
SIN3A-212ENST00000568919 FTHL17Q9BXU8 183 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 NIFKQ9BYG3 293 aaKnown RBP20.42■□□□□ 0.86
SIN3A-212ENST00000568919 VAV3Q9UKW4 847 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 NOC2LQ9Y3T9 749 aaKnown RBP20.42■□□□□ 0.86
SIN3A-212ENST00000568919 TTC3P53804 2025 aa20.42■□□□□ 0.86
SIN3A-212ENST00000568919 DLL1O00548 723 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 CLCN3P51790 818 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 CRYBB1P53674 252 aaPredicted RBP20.41■□□□□ 0.86
SIN3A-212ENST00000568919 NFX1Q12986 1120 aaKnown RBP20.41■□□□□ 0.86
SIN3A-212ENST00000568919 KIZQ2M2Z5 673 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 DIS3L2Q8IYB7 885 aaKnown RBP20.41■□□□□ 0.86
SIN3A-212ENST00000568919 MICALL1Q8N3F8 863 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 TMEM40Q8WWA1 233 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 PPP1R16BQ96T49 567 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 C17orf80Q9BSJ5 609 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 TMX1Q9H3N1 280 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 ERVK-5Q9HDB9 667 aa20.41■□□□□ 0.86
SIN3A-212ENST00000568919 PRRC2BQ5JSZ5 2229 aaKnown RBP20.41■□□□□ 0.86
SIN3A-212ENST00000568919 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 MARCH6O60337 910 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 RPS6KA5O75582 802 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 TMOD1P28289 359 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 CRIPAKQ8N1N5 446 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 LRRC71Q8N4P6 559 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 BANK1Q8NDB2 785 aa20.4■□□□□ 0.86
SIN3A-212ENST00000568919 TSPYL2Q9H2G4 693 aaPredicted RBP20.4■□□□□ 0.86
SIN3A-212ENST00000568919 TMEM150BA6NC51 233 aa20.39■□□□□ 0.85
SIN3A-212ENST00000568919 BAG4O95429 457 aaKnown RBP20.39■□□□□ 0.85
SIN3A-212ENST00000568919 PSMC5P62195 406 aa20.39■□□□□ 0.85
SIN3A-212ENST00000568919 GUCY1B3Q02153 619 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms