RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 USP15Q9Y4E8 981 aaPredicted RBP17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 KIAA1671Q9BY89 1806 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 MEIS1O00470 390 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 GLP2RO95838 553 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 KLRC1P26715 233 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 SREBF1P36956 1147 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 NAPAP54920 295 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 RBM23Q86U06 439 aaKnown RBP17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 ADAM2Q99965 735 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 IRF2BPLQ9H1B7 796 aa17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 ELAC1Q9H777 363 aaKnown RBP17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 BARX2Q9UMQ3 279 aaPredicted RBP17.94■□□□□ 0.46
HERPUD1-215ENST00000568676 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 BACH1O14867 736 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 SLC27A2O14975 620 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 HOXA2O43364 376 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 FGF18O76093 207 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 ARP10275 920 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 LAG3P18627 525 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 ADCY7P51828 1080 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 SIGLEC14Q08ET2 396 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 ITGB3BPQ13352 177 aaPredicted RBP17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 ABHD15Q6UXT9 468 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM184AQ6ZMB5 413 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 THNSL1Q8IYQ7 743 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 FBXL6Q8N531 539 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 RASGRP4Q8TDF6 673 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 SUSD6Q92537 303 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 ANO3Q9BYT9 981 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM161AQ9NX61 479 aa17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 PUF60Q9UHX1 559 aaKnown RBP17.93■□□□□ 0.46
HERPUD1-215ENST00000568676 TECTAO75443 2155 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 TBKBP1A7MCY6 615 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 C9IYK1 514 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 PPFIA3O75145 1194 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 ZNF76P36508 570 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 CRYBB1P53674 252 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 NECTIN1Q15223 517 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 DUSP6Q16828 381 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM266Q2M3C6 531 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 MCTP2Q6DN12 878 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 MIS18BP1Q6P0N0 1132 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 KIAA0319LQ8IZA0 1049 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 LSG1Q9H089 658 aaKnown RBP17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 ATP6V0A4Q9HBG4 840 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 ZNF302Q9NR11 478 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 ST3GAL5Q9UNP4 418 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 CEP131Q9UPN4 1083 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 GINS2Q9Y248 185 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 NOC2LQ9Y3T9 749 aaKnown RBP17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 C5orf42Q9H799 3197 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
HERPUD1-215ENST00000568676 GATMP50440 423 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 NUBP1P53384 320 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 FAM189BP81408 668 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 PLCB3Q01970 1234 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 CREB3L3Q68CJ9 461 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 PDXDC2PQ6P474 469 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 APOA5Q6Q788 366 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 COLGALT1Q8NBJ5 622 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 BBXQ8WY36 941 aaPredicted RBP17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 NGRNQ9NPE2 291 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 TYW1Q9NV66 732 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM260Q9NX78 707 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 BARHL2Q9NY43 387 aa17.91■□□□□ 0.46
HERPUD1-215ENST00000568676 SMCO2A6NFE2 343 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 FSCN2O14926 492 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 MGEA5O60502 916 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 CCNE2O96020 404 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 HOXB8P17481 243 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 PPM1AP35813 382 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 CLK2P49760 499 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 SMAP1Q8IYB5 467 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 PRSS33Q8NF86 280 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM40Q8WWA1 233 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 MRPS27Q92552 414 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 RPGRIP1Q96KN7 1286 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 TBC1D22BQ9NU19 505 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 TCEAL9Q9UHQ7 104 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
HERPUD1-215ENST00000568676 WDFY4Q6ZS81 3184 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 IPO5O00410 1097 aaKnown RBP17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 PER2O15055 1255 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 RCAN1P53805 252 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 ERVFC1P60507 584 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 SETQ01105 290 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 KCNC3Q14003 757 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 RTN1Q16799 776 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 FAM102BQ5T8I3 360 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 ZNF746Q6NUN9 644 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-215ENST00000568676 CCDC60Q8IWA6 550 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms