RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 STAG3L1P0CL83 205 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 CPA1P15085 419 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 CLK2P49760 499 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 AP3B2Q13367 1082 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 ADAM15Q13444 863 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 SMAD4Q13485 552 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 ABHD15Q6UXT9 468 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 RBM23Q86U06 439 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 ATP8B4Q8TF62 1192 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 POF1BQ8WVV4 589 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
NME3-211ENST00000568561 ERVK-5Q9HDB9 667 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 MUTYHQ9UIF7 546 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 TECTAO75443 2155 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 KDM3AQ9Y4C1 1321 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 RPS6KA5O75582 802 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 NRIP1P48552 1158 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 FAM160B1Q5W0V3 765 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 PDXDC2PQ6P474 469 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 KIAA0319LQ8IZA0 1049 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 ZNF302Q9NR11 478 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 WDFY4Q6ZS81 3184 aa17.66■□□□□ 0.42
NME3-211ENST00000568561 IGLV3-22A0A075B6J6 115 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 hCG_1984214I3L0E3 225 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 DHX15O43143 795 aaKnown RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 HBP1O60381 514 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 GLP2RO95838 553 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 ATP4AP20648 1035 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 SARSP49591 514 aaKnown RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 SLC26A2P50443 739 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 RBM10P98175 930 aaKnown RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 KIZQ2M2Z5 673 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 BMP2KLQ5H9B9 411 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 SPOUT1Q5T280 376 aaKnown RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 SWSAP1Q6NVH7 229 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 ZNF713Q8N859 430 aaPredicted RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 OSMRQ99650 979 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 ADAM2Q99965 735 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 CLEC1BQ9P126 229 aa17.65■□□□□ 0.42
NME3-211ENST00000568561 BARX2Q9UMQ3 279 aaPredicted RBP17.65■□□□□ 0.42
NME3-211ENST00000568561 DENND3A2RUS2 1198 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 TBKBP1A7MCY6 615 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 IPO5O00410 1097 aaKnown RBP17.64■□□□□ 0.41
NME3-211ENST00000568561 C22orf31O95567 290 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 FAM102BQ5T8I3 360 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 MIS18BP1Q6P0N0 1132 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 NIPA1Q7RTP0 329 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 RNF135Q8IUD6 432 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 CKAP2LQ8IYA6 745 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 NME8Q8N427 588 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 EFHBQ8N7U6 833 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 PPP2R3CQ969Q6 453 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 ST3GAL5Q9UNP4 418 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 PCDHB7Q9Y5E2 793 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 COL1A2P08123 1366 aa17.64■□□□□ 0.41
NME3-211ENST00000568561 VTNP04004 478 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 FGFR1P11362 822 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
NME3-211ENST00000568561 PFKFB3Q16875 520 aaPredicted RBP17.63■□□□□ 0.41
NME3-211ENST00000568561 NAALADL2Q58DX5 795 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 ZNF484Q5JVG2 852 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 HFE2Q6ZVN8 426 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 FAM228AQ86W67 206 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 RASGRP4Q8TDF6 673 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 CRYGNQ8WXF5 182 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 POP1Q99575 1024 aaKnown RBP17.63■□□□□ 0.41
NME3-211ENST00000568561 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
NME3-211ENST00000568561 C9IYK1 514 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 PER2O15055 1255 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 CLCN3P51790 818 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 FGD1P98174 961 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 ALYREFQ86V81 257 aaKnown RBP17.62■□□□□ 0.41
NME3-211ENST00000568561 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 METTL13Q8N6R0 699 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
NME3-211ENST00000568561 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 RGS18Q9NS28 235 aa17.62■□□□□ 0.41
NME3-211ENST00000568561 EYA4O95677 639 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 CYP3A4P08684 503 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 PRR16Q569H4 304 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 THNSL1Q8IYQ7 743 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 REXO1Q8N1G1 1221 aaKnown RBP17.61■□□□□ 0.41
NME3-211ENST00000568561 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 VN1R2Q8NFZ6 395 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 MICAL1Q8TDZ2 1067 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 ZNF668Q96K58 619 aaPredicted RBP17.61■□□□□ 0.41
NME3-211ENST00000568561 TLE6Q9H808 572 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 C1orf112Q9NSG2 853 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 TYW1Q9NV66 732 aaKnown RBP17.61■□□□□ 0.41
NME3-211ENST00000568561 GABBR1Q9UBS5 961 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
NME3-211ENST00000568561 PCDHB12Q9Y5F1 795 aa17.61■□□□□ 0.41
NME3-211ENST00000568561 ZDBF2Q9HCK1 2354 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms