RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SCG2P13521 617 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 KLRC1P26715 233 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 ZNF76P36508 570 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 IER5LQ5T953 404 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 ABHD15Q6UXT9 468 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 PGBD1Q96JS3 809 aa17.13■□□□□ 0.33
COMMD4-223ENST00000568301 CCNE2O96020 404 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 HMGB1P09429 215 aaKnown RBP17.12■□□□□ 0.33
COMMD4-223ENST00000568301 KRT32Q14532 448 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
COMMD4-223ENST00000568301 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 PRSS33Q8NF86 280 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-223ENST00000568301 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-223ENST00000568301 TMEM260Q9NX78 707 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 DMDP11532 3685 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 COL1A2P08123 1366 aa17.12■□□□□ 0.33
COMMD4-223ENST00000568301 TMEM221A6NGB7 291 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 M0R296 226 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 BACH1O14867 736 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
COMMD4-223ENST00000568301 CYP3A4P08684 503 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 GATMP50440 423 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 MCTP2Q6DN12 878 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 TRIM67Q6ZTA4 783 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 BMP8AQ7Z5Y6 402 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 RBM23Q86U06 439 aaKnown RBP17.11■□□□□ 0.33
COMMD4-223ENST00000568301 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 EFHBQ8N7U6 833 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
COMMD4-223ENST00000568301 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 GLP2RO95838 553 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 CDC27P30260 824 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 NRIP1P48552 1158 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 COASYQ13057 564 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 PBXIP1Q96AQ6 731 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 ZNF302Q9NR11 478 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-223ENST00000568301 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
COMMD4-223ENST00000568301 ESYT2A0FGR8 921 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
COMMD4-223ENST00000568301 GPR182O15218 404 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 ZXDAP98168 799 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 JAKMIP3Q5VZ66 844 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 SWSAP1Q6NVH7 229 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 ZMYND12Q9H0C1 365 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 CDHR5Q9HBB8 845 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
COMMD4-223ENST00000568301 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
COMMD4-223ENST00000568301 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-223ENST00000568301 ZDBF2Q9HCK1 2354 aa17.08■□□□□ 0.33
COMMD4-223ENST00000568301 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
COMMD4-223ENST00000568301 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 ATP4AP20648 1035 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 UBE3AQ05086 875 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 CBX2Q14781 532 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 ZNF746Q6NUN9 644 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 CCDC12Q8WUD4 166 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 ADAM2Q99965 735 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 AAASQ9NRG9 546 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms