RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 VWA3BQ502W6 1294 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 CNGA4Q8IV77 575 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 C4orf19Q8IY42 314 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 SMAP1Q8IYB5 467 aaPredicted RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 SYCP3Q8IZU3 236 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 ATP6V0A1Q93050 837 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 PORCNQ9H237 461 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 NDST4Q9H3R1 872 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 GPRC5CQ9NQ84 441 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 OLFML3Q9NRN5 406 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 KCND2Q9NZV8 630 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 LARSQ9P2J5 1176 aaKnown RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 ODF2LQ9ULJ1 636 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 K7ENM7 598 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 CALUO43852 315 aaPredicted RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 MFAP3LO75121 409 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 GUCY2CP25092 1073 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MAN2A1Q16706 1144 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 ZCWPW2Q504Y3 356 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MIIPQ5JXC2 388 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MIS18BP1Q6P0N0 1132 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 OTUD6AQ7L8S5 288 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 CCDC60Q8IWA6 550 aaPredicted RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 FAM133AQ8N9E0 248 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MPHOSPH6Q99547 160 aaKnown RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 MMRN2Q9H8L6 949 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
SMG1-215ENST00000568239 ITIH6Q6UXX5 1313 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 MCM3APO60318 1980 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 LCTP09848 1927 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 SOWAHDA6NJG2 315 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 ARHGAP6O43182 974 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TNNT1P13805 278 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 HOXD13P35453 343 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 HUNKP57058 714 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 LY6KQ17RY6 165 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TSR1Q2NL82 804 aaKnown RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 TCERG1LQ5VWI1 586 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 E4F1Q66K89 784 aaPredicted RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 STXBP4Q6ZWJ1 553 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 ANO5Q75V66 913 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 ZNF720Q7Z2F6 126 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CCAR2Q8N163 923 aaKnown RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 CCDC155Q8N6L0 562 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 ZNF507Q8TCN5 953 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 BRI3BPQ8WY22 251 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 MS4A4AQ96JQ5 239 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 FAM207AQ9NSI2 230 aaPredicted RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 LUC7L2Q9Y383 392 aaKnown RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 PCDHB13Q9Y5F0 798 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG1-215ENST00000568239 A0A1W2PQC6 194 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CCDC169A6NNP5 214 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 ZNF862O60290 1169 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 STX10O60499 249 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 UBA1P22314 1058 aaKnown RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 PEX3P56589 373 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CCNA1P78396 465 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TRIM14Q14142 442 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 DCAF17Q5H9S7 520 aaPredicted RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 EPM2AIP1Q7L775 607 aaPredicted RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 DAW1Q8N136 415 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 RDM1Q8NG50 284 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CRACR2AQ9BSW2 395 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 DESI2Q9BSY9 194 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TMX1Q9H3N1 280 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 MROH8Q9H579 483 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 MLXIPQ9HAP2 919 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 TYW1Q9NV66 732 aaKnown RBP7.78□□□□□ -1.16
SMG1-215ENST00000568239 SEL1LQ9UBV2 794 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 NFASCO94856 1347 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 LOXHD1Q8IVV2 1947 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 CENPFP49454 3210 aa7.78□□□□□ -1.16
SMG1-215ENST00000568239 ZNFX1Q9P2E3 1918 aaKnown RBP7.77□□□□□ -1.16
SMG1-215ENST00000568239 PDXKO00764 312 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 DKC1O60832 514 aaKnown RBP eCLIP7.77□□□□□ -1.16
SMG1-215ENST00000568239 LYPLA2O95372 231 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 GGPS1O95749 300 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 GNA14O95837 355 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 NR3C1P04150 777 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 RPL13P26373 211 aaKnown RBP7.77□□□□□ -1.16
SMG1-215ENST00000568239 COPB2P35606 906 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 CYP2J2P51589 502 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 SOX10P56693 466 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 FKBP1BP68106 108 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 PRKCEQ02156 737 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 MAPK7Q13164 816 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 MTF1Q14872 753 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 PTPN14Q15678 1187 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 EDRF1Q3B7T1 1238 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 HS2ST1Q7LGA3 356 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 GPIHBP1Q8IV16 184 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 FBXO16Q8IX29 292 aaPredicted RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms