RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
CAPN3-217ENST00000567817 MVKQ03426 396 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 RRS1Q15050 365 aaKnown RBP6.39□□□□□ -1.39
CAPN3-217ENST00000567817 ANKRD45Q5TZF3 282 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 KCNN1Q92952 543 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 MRGPRX3Q96LB0 322 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 DCTPP1Q9H773 170 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 CD320Q9NPF0 282 aa6.39□□□□□ -1.39
CAPN3-217ENST00000567817 ARID1BQ8NFD5 2236 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-217ENST00000567817 MAP2P11137 1827 aaKnown RBP6.39□□□□□ -1.39
CAPN3-217ENST00000567817 RASSF10A6NK89 507 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 SRGAP3O43295 1099 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 EPB41L2O43491 1005 aaKnown RBP6.38□□□□□ -1.39
CAPN3-217ENST00000567817 NAALADL2Q58DX5 795 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 MRM1Q6IN84 353 aaKnown RBP6.38□□□□□ -1.39
CAPN3-217ENST00000567817 ATG14Q6ZNE5 492 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 AMIGO3Q86WK7 504 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 LDHDQ86WU2 507 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 CILP2Q8IUL8 1156 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 ANKRD44Q8N8A2 993 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 HNRNPLLQ8WVV9 542 aaKnown RBP6.38□□□□□ -1.39
CAPN3-217ENST00000567817 COPS5Q92905 334 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 PPP1R14AQ96A00 147 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 TOX2Q96NM4 488 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 GBP4Q96PP9 640 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 LNPKQ9C0E8 428 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 EPN3Q9H201 632 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 PDLIM7Q9NR12 457 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 PASKQ96RG2 1323 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 TIAM2Q8IVF5 1701 aa6.38□□□□□ -1.39
CAPN3-217ENST00000567817 THSD7BQ9C0I4 1608 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 FRAT2O75474 233 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-217ENST00000567817 GJB6O95452 261 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 MSL3P1P0C860 447 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 GYS1P13807 737 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 PAMP19021 973 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 SDHBP21912 280 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 HOXC9P31274 260 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 RFC4P35249 363 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 DLG4P78352 724 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
CAPN3-217ENST00000567817 SCRN1Q12765 414 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 CBX2Q14781 532 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-217ENST00000567817 NR1I3Q14994 352 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 RAB3GAP1Q15042 981 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 RABEP1Q15276 862 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 SKOR2Q2VWA4 1001 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-217ENST00000567817 SV2CQ496J9 727 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 GTF2IRD2BQ6EKJ0 949 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 ANKS3Q6ZW76 656 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 GTF2IRD2Q86UP8 949 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 TSPYL6Q8N831 410 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 C8orf58Q8NAV2 365 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 STK31Q9BXU1 1019 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 NKX2-4Q9H2Z4 354 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 CYP26B1Q9NR63 512 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 KLHL14Q9P2G3 628 aa6.37□□□□□ -1.39
CAPN3-217ENST00000567817 NPHP3-ACAD11A0A0J9YXS1 232 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 KLF4O43474 513 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 REC8O95072 547 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 GNAI3P08754 354 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 HOXB7P09629 217 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 VIPR1P32241 457 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 ECE1P42892 770 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 AMPHP49418 695 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 FZD5Q13467 585 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 KCNA10Q16322 511 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 DDR2Q16832 855 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 ZNF227Q86WZ6 799 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 PIGBQ92521 554 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
CAPN3-217ENST00000567817 SLKQ9H2G2 1235 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-217ENST00000567817 SIRT5Q9NXA8 310 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 TMOD3Q9NYL9 352 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 MBD1Q9UIS9 605 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-217ENST00000567817 TSPYL4Q9UJ04 414 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 HDAC5Q9UQL6 1122 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 ITGB4P16144 1822 aa6.36□□□□□ -1.39
CAPN3-217ENST00000567817 NUDT19A8MXV4 375 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 RPS6KA4O75676 772 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 CYBBP04839 570 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 GNAI2P04899 355 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 ITGAVP06756 1048 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 HSP90AB1P08238 724 aaKnown RBP6.35□□□□□ -1.39
CAPN3-217ENST00000567817 DBHP09172 617 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 MCM2P49736 904 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 DEFB115Q30KQ5 88 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 CEP85Q6P2H3 762 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 PAQR3Q6TCH7 311 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 RPTNQ6XPR3 784 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 CELF2-AS1Q8N7Q2 184 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms