RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 NEK4P51957 841 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 ADGRE1Q14246 886 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 SWSAP1Q6NVH7 229 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 TAF2Q6P1X5 1199 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 TEX2Q8IWB9 1127 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 BLIDQ8IZY5 108 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 GDPD5Q8WTR4 605 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 IFIH1Q9BYX4 1025 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 SH3GLB2Q9NR46 395 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 GJB4Q9NTQ9 266 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 ATG2AQ2TAZ0 1938 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 EPOPA6NHQ4 379 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 RRN3P2A6NIE6 340 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 DLL1O00548 723 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 EFCAB14O75071 495 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 CAND2O75155 1236 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 CSPG5O95196 566 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 CHRNA1P02708 482 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 PSAPP07602 524 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 XBP1P17861 261 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 ANAPC15P60006 121 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 MRPS6P82932 125 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 KRT76Q01546 638 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 TAP1Q03518 808 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 ANKRD1Q15327 319 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 INF2Q27J81 1249 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 KRT40Q6A162 431 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 PHOSPHO2Q8TCD6 241 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 TBC1D22BQ9NU19 505 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 GABBR1Q9UBS5 961 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
GTF3C1-206ENST00000566779 MSH4O15457 936 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 MARCH6O60337 910 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 PFKFB2O60825 505 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 CD52P31358 61 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 ADAM17P78536 824 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 LPIN1Q14693 890 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 PLEKHG4Q58EX7 1191 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 MARCH8Q5T0T0 291 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 ABHD15Q6UXT9 468 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 PLPPR4Q7Z2D5 763 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 ATP8B4Q8TF62 1192 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 TNPO1Q92973 898 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 TRPV2Q9Y5S1 764 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 TTC3P53804 2025 aa11.43□□□□□ -0.58
GTF3C1-206ENST00000566779 STK36Q9NRP7 1315 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 COL6A3P12111 3177 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 MBLAC1A4D2B0 266 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 GJB5O95377 273 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 KLRC1P26715 233 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 PAK2Q13177 524 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 IER5Q5VY09 327 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 PIK3AP1Q6ZUJ8 805 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 MIER3Q7Z3K6 550 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 KRT25Q7Z3Z0 450 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 SMAP1Q8IYB5 467 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 WASF1Q92558 559 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 LENG9Q96B70 501 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 ZNF668Q96K58 619 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 C22orf23Q9BZE7 217 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 UNC45AQ9H3U1 944 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 DDX25Q9UHL0 483 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 PCDHA10Q9Y5I2 948 aa11.42□□□□□ -0.58
GTF3C1-206ENST00000566779 FNDC1Q4ZHG4 1894 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 LINC01553A4QN01 128 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 SLC37A4O43826 429 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 HBP1O60381 514 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 JAK2O60674 1132 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 CTDNEP1O95476 244 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 CIITAP33076 1130 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 SLC26A2P50443 739 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 CLCN3P51790 818 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 PRKCEQ02156 737 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 MGAT3Q09327 533 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 GRB10Q13322 594 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 TRIM29Q14134 588 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms