RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 PPP4R2Q9NY27 417 aa25.31■■□□□ 1.64
GGA2-206ENST00000566547 VPS54Q9P1Q0 977 aa25.31■■□□□ 1.64
GGA2-206ENST00000566547 NOC2LQ9Y3T9 749 aaKnown RBP25.31■■□□□ 1.64
GGA2-206ENST00000566547 SQORQ9Y6N5 450 aa25.31■■□□□ 1.64
GGA2-206ENST00000566547 WDR81Q562E7 1941 aa25.31■■□□□ 1.64
GGA2-206ENST00000566547 MGEA5O60502 916 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 RB1P06400 928 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 AKAP17AQ02040 695 aaKnown RBP25.3■■□□□ 1.64
GGA2-206ENST00000566547 NPAS4Q8IUM7 802 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 NME8Q8N427 588 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 CCDC12Q8WUD4 166 aaPredicted RBP25.3■■□□□ 1.64
GGA2-206ENST00000566547 TMEM40Q8WWA1 233 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 PABPC5Q96DU9 382 aaKnown RBP25.3■■□□□ 1.64
GGA2-206ENST00000566547 C1QTNF1Q9BXJ1 281 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 AGXT2Q9BYV1 514 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 CLDND1Q9NY35 253 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 KDM3AQ9Y4C1 1321 aa25.3■■□□□ 1.64
GGA2-206ENST00000566547 FAM178BQ8IXR5 827 aa25.29■■□□□ 1.64
GGA2-206ENST00000566547 RWDD3Q9Y3V2 267 aa25.29■■□□□ 1.64
GGA2-206ENST00000566547 GRXCR2A6NFK2 248 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 EDIL3O43854 480 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 GNA11P29992 359 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 PDIA3P30101 505 aaKnown RBP25.28■■□□□ 1.64
GGA2-206ENST00000566547 GTF2F1P35269 517 aaKnown RBP eCLIP25.28■■□□□ 1.64
GGA2-206ENST00000566547 SETQ01105 290 aaPredicted RBP25.28■■□□□ 1.64
GGA2-206ENST00000566547 ZNF484Q5JVG2 852 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
GGA2-206ENST00000566547 ERVK-5Q9HDB9 667 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 TBC1D22BQ9NU19 505 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 GABBR1Q9UBS5 961 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 COL1A2P08123 1366 aa25.28■■□□□ 1.64
GGA2-206ENST00000566547 FAM86C2PA6NEL3 165 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 RPS6KA5O75582 802 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 C22orf31O95567 290 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 VTNP04004 478 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 DNAJB1P25685 340 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 HYAL1Q12794 435 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 CAMK1Q14012 370 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 CLUL1Q15846 466 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 KIZQ2M2Z5 673 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 ZNF746Q6NUN9 644 aaPredicted RBP25.27■■□□□ 1.64
GGA2-206ENST00000566547 CMTR2Q8IYT2 770 aaKnown RBP25.27■■□□□ 1.64
GGA2-206ENST00000566547 GJA10Q969M2 543 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 LENG9Q96B70 501 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 RNF26Q9BY78 433 aaPredicted RBP25.27■■□□□ 1.64
GGA2-206ENST00000566547 IGFLR1Q9H665 355 aa25.27■■□□□ 1.64
GGA2-206ENST00000566547 MAFBQ9Y5Q3 323 aaPredicted RBP25.27■■□□□ 1.64
GGA2-206ENST00000566547 STAG3L1P0CL83 205 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 IFNAR1P17181 557 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 SSTR3P32745 418 aaPredicted RBP25.26■■□□□ 1.63
GGA2-206ENST00000566547 LTBRP36941 435 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
GGA2-206ENST00000566547 COL19A1Q14993 1142 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 GJD3Q8N144 294 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 METTL13Q8N6R0 699 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 OSMRQ99650 979 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 LRFN3Q9BTN0 628 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 LMAN2LQ9H0V9 348 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 TCEAL9Q9UHQ7 104 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 LRFN2Q9ULH4 789 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 PLAGL2Q9UPG8 496 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 SAMM50Q9Y512 469 aa25.26■■□□□ 1.63
GGA2-206ENST00000566547 TRIOO75962 3097 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 ITGB1P05556 798 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 PSAPP07602 524 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 CIITAP33076 1130 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 CLCN3P51790 818 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 DLX2Q07687 328 aaPredicted RBP25.25■■□□□ 1.63
GGA2-206ENST00000566547 MCTP2Q6DN12 878 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 BICD2Q8TD16 824 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 BBXQ8WY36 941 aaPredicted RBP25.25■■□□□ 1.63
GGA2-206ENST00000566547 ST3GAL5Q9UNP4 418 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 PCDHA10Q9Y5I2 948 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 FNDC1Q4ZHG4 1894 aaPredicted RBP25.25■■□□□ 1.63
GGA2-206ENST00000566547 PLXNA4Q9HCM2 1894 aa25.25■■□□□ 1.63
GGA2-206ENST00000566547 MSH4O15457 936 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 LINC01565O15544 149 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 MMP1P03956 469 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 SARSP49591 514 aaKnown RBP25.24■■□□□ 1.63
GGA2-206ENST00000566547 RUFY3Q7L099 469 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 SMAP1Q8IYB5 467 aaPredicted RBP25.24■■□□□ 1.63
GGA2-206ENST00000566547 KLHL23Q8NBE8 558 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 CCDC148Q8NFR7 591 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 ADAM2Q99965 735 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 PLVAPQ9BX97 442 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 C11orf16Q9NQ32 467 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 HCSTQ9UBK5 93 aa25.24■■□□□ 1.63
GGA2-206ENST00000566547 DENND3A2RUS2 1198 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 CHMP2AO43633 222 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 IRS1P35568 1242 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 EVCP57679 992 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 NLRP5P59047 1200 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 FAM102BQ5T8I3 360 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 FAM228AQ86W67 206 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 SPPL3Q8TCT6 385 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 ZNF668Q96K58 619 aaPredicted RBP25.23■■□□□ 1.63
GGA2-206ENST00000566547 PCDHGC5Q9Y5F6 944 aa25.23■■□□□ 1.63
GGA2-206ENST00000566547 ZNF862O60290 1169 aa25.22■■□□□ 1.63
GGA2-206ENST00000566547 GPR32O75388 356 aa25.22■■□□□ 1.63
GGA2-206ENST00000566547 UGCGQ16739 394 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms