RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
UBR1-206ENST00000566493 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
UBR1-206ENST00000566493 CCDC148Q8NFR7 591 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 CLP1Q92989 425 aaKnown RBP13.55□□□□□ -0.24
UBR1-206ENST00000566493 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
UBR1-206ENST00000566493 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 UIMC1Q96RL1 719 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 EPHX3Q9H6B9 360 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 CLDND1Q9NY35 253 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 SNX14Q9Y5W7 946 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 NCOR1O75376 2440 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 KDM3AQ9Y4C1 1321 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 COL1A2P08123 1366 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 MYH9P35579 1960 aaKnown RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 IGLV3-22A0A075B6J6 115 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 H3BQ06 376 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 GRM6O15303 877 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 REC8O95072 547 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 PSAPP07602 524 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 IL9P15248 144 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 TMEM31Q5JXX7 168 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 RTN4RL1Q86UN2 441 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 CCDC60Q8IWA6 550 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 SMAP1Q8IYB5 467 aaPredicted RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 GJD3Q8N144 294 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 LINC01599Q8WXQ3 324 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 PHKBQ93100 1093 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 RC3H2Q9HBD1 1191 aaKnown RBP13.54□□□□□ -0.24
UBR1-206ENST00000566493 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
UBR1-206ENST00000566493 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 DHX15O43143 795 aaKnown RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 PKN1Q16512 942 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 PAN2Q504Q3 1202 aaKnown RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 PRR16Q569H4 304 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 KIAA0319LQ8IZA0 1049 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 CRYGNQ8WXF5 182 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 P2RX5Q93086 422 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 PPP2R3CQ969Q6 453 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 RNF26Q9BY78 433 aaPredicted RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 RAPGEFL1Q9UHV5 662 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 PCDHA10Q9Y5I2 948 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
UBR1-206ENST00000566493 NID2Q14112 1375 aa13.53□□□□□ -0.24
UBR1-206ENST00000566493 EVPLQ92817 2033 aa13.52□□□□□ -0.24
UBR1-206ENST00000566493 BDP1A6H8Y1 2624 aa13.52□□□□□ -0.24
UBR1-206ENST00000566493 GPR182O15218 404 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 CSPG5O95196 566 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 MMP1P03956 469 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 LINC00271P0C7V0 271 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 SARSP49591 514 aaKnown RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 ASTLQ6HA08 431 aaPredicted RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 TRMT1LQ7Z2T5 733 aaKnown RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 FAM167AQ96KS9 214 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 TMX1Q9H3N1 280 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 IGFLR1Q9H665 355 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
UBR1-206ENST00000566493 NOC2LQ9Y3T9 749 aaKnown RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 MAFBQ9Y5Q3 323 aaPredicted RBP13.52□□□□□ -0.25
UBR1-206ENST00000566493 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 IFNAR1P17181 557 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 CIITAP33076 1130 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 CRYBB1P53674 252 aaPredicted RBP13.51□□□□□ -0.25
UBR1-206ENST00000566493 NLRP5P59047 1200 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
UBR1-206ENST00000566493 HYAL1Q12794 435 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 GSE1Q14687 1217 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 SPOUT1Q5T280 376 aaKnown RBP13.51□□□□□ -0.25
UBR1-206ENST00000566493 TRIM22Q8IYM9 498 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 CRIPAKQ8N1N5 446 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 RASGRP4Q8TDF6 673 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 ADAM2Q99965 735 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
UBR1-206ENST00000566493 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms