RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 ST3GAL1Q11201 340 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 PAK2Q13177 524 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 SWSAP1Q6NVH7 229 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 MIS18BP1Q6P0N0 1132 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 CCDC60Q8IWA6 550 aaPredicted RBP21.46■■□□□ 1.03
SPSB3-207ENST00000565550 ATP8B4Q8TF62 1192 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 AIFM3Q96NN9 605 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 LMAN2LQ9H0V9 348 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 C6orf50Q9HD87 102 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 ZNF302Q9NR11 478 aa21.46■■□□□ 1.03
SPSB3-207ENST00000565550 TTC3P53804 2025 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 ESYT2A0FGR8 921 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 PFKFB2O60825 505 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 COL19A1Q14993 1142 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 TMEM266Q2M3C6 531 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 PUS10Q3MIT2 529 aaKnown RBP21.45■■□□□ 1.02
SPSB3-207ENST00000565550 PDXDC2PQ6P474 469 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 NPAS4Q8IUM7 802 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 GJD3Q8N144 294 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 ZNF577Q9BSK1 485 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 LRFN3Q9BTN0 628 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 BACH2Q9BYV9 841 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 SLKQ9H2G2 1235 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-207ENST00000565550 TMX1Q9H3N1 280 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 CLDND1Q9NY35 253 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 GINS2Q9Y248 185 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 MRPL42Q9Y6G3 142 aaKnown RBP21.45■■□□□ 1.02
SPSB3-207ENST00000565550 KDM3AQ9Y4C1 1321 aa21.45■■□□□ 1.02
SPSB3-207ENST00000565550 CTDNEP1O95476 244 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 STAG3L1P0CL83 205 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 ATP4AP20648 1035 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 NFX1Q12986 1120 aaKnown RBP21.44■■□□□ 1.02
SPSB3-207ENST00000565550 MCTP2Q6DN12 878 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 CMTR2Q8IYT2 770 aaKnown RBP21.44■■□□□ 1.02
SPSB3-207ENST00000565550 KIAA0319LQ8IZA0 1049 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 CCDC12Q8WUD4 166 aaPredicted RBP21.44■■□□□ 1.02
SPSB3-207ENST00000565550 PLVAPQ9BX97 442 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 RNF26Q9BY78 433 aaPredicted RBP21.44■■□□□ 1.02
SPSB3-207ENST00000565550 CDHR5Q9HBB8 845 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 ALG13Q9NP73 1137 aaKnown RBP21.44■■□□□ 1.02
SPSB3-207ENST00000565550 MYO7AQ13402 2215 aa21.44■■□□□ 1.02
SPSB3-207ENST00000565550 PI4K2BG5E9Z4 385 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 CSPG5O95196 566 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 PAN2Q504Q3 1202 aaKnown RBP21.43■■□□□ 1.02
SPSB3-207ENST00000565550 ZNF484Q5JVG2 852 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 TMEM31Q5JXX7 168 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 CKAP2LQ8IYA6 745 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 REXO1Q8N1G1 1221 aaKnown RBP21.43■■□□□ 1.02
SPSB3-207ENST00000565550 TBC1D22BQ9NU19 505 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 VPS54Q9P1Q0 977 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 PLAGL2Q9UPG8 496 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 NLRC5Q86WI3 1866 aa21.43■■□□□ 1.02
SPSB3-207ENST00000565550 ZBTB42B2RXF5 422 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 CPLX1O14810 134 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 NCK2O43639 380 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 COL1A2P08123 1366 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 IBSPP21815 317 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 GNA11P29992 359 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 SSTR3P32745 418 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 LTBRP36941 435 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 GATMP50440 423 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 AKAP17AQ02040 695 aaKnown RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 SSRP1Q08945 709 aaKnown RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 HYAL1Q12794 435 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 RALGAPA2Q2PPJ7 1873 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 TRMT1LQ7Z2T5 733 aaKnown RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 RASGRP4Q8TDF6 673 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 TBC1D32Q96NH3 1257 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 ERVK-5Q9HDB9 667 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 LRFN2Q9ULH4 789 aa21.42■■□□□ 1.02
SPSB3-207ENST00000565550 NOC2LQ9Y3T9 749 aaKnown RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 MAFBQ9Y5Q3 323 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-207ENST00000565550 RPS6KA5O75582 802 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
SPSB3-207ENST00000565550 MMP1P03956 469 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
SPSB3-207ENST00000565550 CAMK1Q14012 370 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 PRR16Q569H4 304 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 ZNF746Q6NUN9 644 aaPredicted RBP21.41■■□□□ 1.02
SPSB3-207ENST00000565550 TMEM40Q8WWA1 233 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 P2RX5Q93086 422 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
SPSB3-207ENST00000565550 FAM86C2PA6NEL3 165 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 MGEA5O60502 916 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 GPR37L1O60883 481 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 CIITAP33076 1130 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 SARSP49591 514 aaKnown RBP21.4■■□□□ 1.02
SPSB3-207ENST00000565550 CTC1Q2NKJ3 1217 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 BBXQ8WY36 941 aaPredicted RBP21.4■■□□□ 1.02
SPSB3-207ENST00000565550 PPP1R16BQ96T49 567 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 IGFLR1Q9H665 355 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
SPSB3-207ENST00000565550 ST3GAL5Q9UNP4 418 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 PCDHB7Q9Y5E2 793 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 PCDHA10Q9Y5I2 948 aa21.4■■□□□ 1.02
SPSB3-207ENST00000565550 C22orf31O95567 290 aa21.39■■□□□ 1.01
SPSB3-207ENST00000565550 ITGB1P05556 798 aa21.39■■□□□ 1.01
SPSB3-207ENST00000565550 PSAPP07602 524 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms