RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 BMP3P12645 472 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 ITGA4P13612 1032 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 GNGT1P63211 74 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 LLGL1Q15334 1064 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 HYIQ5T013 277 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 ALKBH5Q6P6C2 394 aaKnown RBP14.75□□□□□ -0.05
CLK3-215ENST00000564353 SLFN12Q8IYM2 578 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 WDR18Q9BV38 432 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 OSGEPQ9NPF4 335 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 WRAP73Q9P2S5 460 aaPredicted RBP14.75□□□□□ -0.05
CLK3-215ENST00000564353 NPR1P16066 1061 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 RPA1P27694 616 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 MEI1Q5TIA1 1274 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 SYT2Q8N9I0 419 aaPredicted RBP14.75□□□□□ -0.05
CLK3-215ENST00000564353 ERMNQ8TAM6 284 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 FAM107BQ9H098 131 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 FBXO28Q9NVF7 368 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 PRR12Q9ULL5 1215 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 UBR3Q6ZT12 1888 aa14.75□□□□□ -0.05
CLK3-215ENST00000564353 HSF2BPO75031 334 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 EPHB4P54760 987 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 PRPF4BQ13523 1007 aaKnown RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 TAF4BQ92750 862 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 CCDC17Q96LX7 622 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 ZDHHC15Q96MV8 337 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 ABCB11O95342 1321 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 RPS6KA1Q15418 735 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 PCIF1Q9H4Z3 704 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 NAGPAQ9UK23 515 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 TMEM150BA6NC51 233 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 RBAK-RBAKDNI3L0D1 243 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 TGFB1I1O43294 461 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 FAM13AO94988 1023 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 GNA14O95837 355 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 HPDP32754 393 aaPredicted RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 DGKZQ13574 1117 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 RBM26Q5T8P6 1007 aaKnown RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 RINT1Q6NUQ1 792 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 MAATS1Q7Z4T9 603 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 SLC35C1Q96A29 364 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 IQCDQ96DY2 449 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 CELF4Q9BZC1 486 aaKnown RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 GLIS2Q9BZE0 524 aaPredicted RBP14.74□□□□□ -0.05
CLK3-215ENST00000564353 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 VAV3Q9UKW4 847 aa14.74□□□□□ -0.05
CLK3-215ENST00000564353 PRLRP16471 622 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 IRAK1P51617 712 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLK3-215ENST00000564353 LRCH2Q5VUJ6 765 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 RNF10Q8N5U6 811 aaKnown RBP14.73□□□□□ -0.05
CLK3-215ENST00000564353 BCAS4Q8TDM0 211 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 AIPL1Q9NZN9 384 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 BRWD3Q6RI45 1802 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
CLK3-215ENST00000564353 EPB41P11171 864 aaKnown RBP14.73□□□□□ -0.05
CLK3-215ENST00000564353 GUCY1A3Q02108 690 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 CBWD6Q4V339 395 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 CBWD3Q5JTY5 395 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 CBWD5Q5RIA9 395 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 TMEM179Q6ZVK1 233 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 DAAM2Q86T65 1068 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 PALB2Q86YC2 1186 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 INPP4AQ96PE3 977 aaPredicted RBP14.73□□□□□ -0.05
CLK3-215ENST00000564353 CAPS2Q9BXY5 557 aa14.73□□□□□ -0.05
CLK3-215ENST00000564353 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
CLK3-215ENST00000564353 FRMD3A2A2Y4 597 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 ZNF233A6NK53 670 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 ARP10275 920 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 NNTQ13423 1086 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 EPHA7Q15375 998 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 DPY19L2P1Q6NXN4 242 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 IFT20Q8IY31 132 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 ZSWIM2Q8NEG5 633 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 CRYGNQ8WXF5 182 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 VEZTQ9HBM0 779 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 TAS2R14Q9NYV8 317 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 AMACRQ9UHK6 382 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 CYP3A7-CYP3A51PA0A087WV96 503 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 DDX3XO00571 662 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLK3-215ENST00000564353 BACH1O14867 736 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
CLK3-215ENST00000564353 RAD17O75943 681 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 SLITRK3O94933 977 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 IVLP07476 585 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 CYP3A7P24462 503 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 ALDH1B1P30837 517 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 FLT3P36888 993 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 SREBF1P36956 1147 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 ZNF211Q13398 564 aaPredicted RBP14.72□□□□□ -0.05
CLK3-215ENST00000564353 EDRF1Q3B7T1 1238 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 CFAP58Q5T655 872 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 METTL13Q8N6R0 699 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 DPH5Q9H2P9 285 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 YY1AP1Q9H869 796 aa14.72□□□□□ -0.05
CLK3-215ENST00000564353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms