RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 B3GNT9Q6UX72 402 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 POTEDQ86YR6 584 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 NME8Q8N427 588 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 C8orf76Q96K31 380 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 EVPLQ92817 2033 aa34.62■■■■□ 3.13
CMTM4-204ENST00000563952 SAFBQ15424 915 aaKnown RBP eCLIP34.62■■■■□ 3.13
CMTM4-204ENST00000563952 TSHZ1Q6ZSZ6 1077 aa34.62■■■■□ 3.13
CMTM4-204ENST00000563952 METTL13Q8N6R0 699 aa34.62■■■■□ 3.13
CMTM4-204ENST00000563952 GAS2L1Q99501 681 aaPredicted RBP34.62■■■■□ 3.13
CMTM4-204ENST00000563952 CELF4Q9BZC1 486 aaKnown RBP34.62■■■■□ 3.13
CMTM4-204ENST00000563952 ARHGEF15O94989 841 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 HMGN5P82970 282 aaKnown RBP34.61■■■■□ 3.13
CMTM4-204ENST00000563952 KIAA0319LQ8IZA0 1049 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 FAM184AQ8NB25 1140 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 MAFAQ8NHW3 353 aaPredicted RBP34.61■■■■□ 3.13
CMTM4-204ENST00000563952 CERS4Q9HA82 394 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 VAV3Q9UKW4 847 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 GINS2Q9Y248 185 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 LOXHD1Q8IVV2 1947 aa34.61■■■■□ 3.13
CMTM4-204ENST00000563952 CHD9Q3L8U1 2897 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 COL6A3P12111 3177 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 LCHNA4D1U4 455 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 TAP1Q03518 808 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 HAS1Q92839 578 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 RAD9AQ99638 391 aa34.6■■■■□ 3.13
CMTM4-204ENST00000563952 AGO3Q9H9G7 860 aaKnown RBP34.6■■■■□ 3.13
CMTM4-204ENST00000563952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP34.59■■■■□ 3.13
CMTM4-204ENST00000563952 TBX3O15119 743 aa34.59■■■■□ 3.13
CMTM4-204ENST00000563952 CD52P31358 61 aa34.59■■■■□ 3.13
CMTM4-204ENST00000563952 PPP2R5CQ13362 524 aa34.59■■■■□ 3.13
CMTM4-204ENST00000563952 BANK1Q8NDB2 785 aa34.59■■■■□ 3.13
CMTM4-204ENST00000563952 PPP1R16BQ96T49 567 aa34.59■■■■□ 3.13
CMTM4-204ENST00000563952 EML1O00423 815 aa34.58■■■■□ 3.13
CMTM4-204ENST00000563952 UPP2O95045 317 aa34.58■■■■□ 3.13
CMTM4-204ENST00000563952 BAG4O95429 457 aaKnown RBP34.58■■■■□ 3.13
CMTM4-204ENST00000563952 TBC1D32Q96NH3 1257 aa34.58■■■■□ 3.13
CMTM4-204ENST00000563952 SEPT9Q9UHD8 586 aaPredicted RBP34.58■■■■□ 3.13
CMTM4-204ENST00000563952 CDH23Q9H251 3354 aa34.58■■■■□ 3.13
CMTM4-204ENST00000563952 MYO9BQ13459 2157 aa34.57■■■■□ 3.13
CMTM4-204ENST00000563952 MAGEB2O15479 319 aa34.57■■■■□ 3.12
CMTM4-204ENST00000563952 USP38Q8NB14 1042 aa34.57■■■■□ 3.12
CMTM4-204ENST00000563952 SQORQ9Y6N5 450 aa34.57■■■■□ 3.12
CMTM4-204ENST00000563952 KDM3AQ9Y4C1 1321 aa34.56■■■■□ 3.12
CMTM4-204ENST00000563952 IGFBP4P22692 258 aa34.56■■■■□ 3.12
CMTM4-204ENST00000563952 CLCN3P51790 818 aa34.56■■■■□ 3.12
CMTM4-204ENST00000563952 EFCAB12Q6NXP0 572 aa34.56■■■■□ 3.12
CMTM4-204ENST00000563952 SLFN12Q8IYM2 578 aa34.56■■■■□ 3.12
CMTM4-204ENST00000563952 TMEM150BA6NC51 233 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 WNT7AO00755 349 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 VTNP04004 478 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 ATP2B1P20020 1258 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 PSMC5P62195 406 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 PAK2Q13177 524 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 ADGRE1Q14246 886 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 XKR3Q5GH77 459 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 NCAPH2Q6IBW4 605 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 LRRC71Q8N4P6 559 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 ARNTL2Q8WYA1 636 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 TOP1MTQ969P6 601 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 CDHR5Q9HBB8 845 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 INSL6Q9Y581 213 aa34.55■■■■□ 3.12
CMTM4-204ENST00000563952 CALCRLQ16602 461 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 KIZQ2M2Z5 673 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 TMEM266Q2M3C6 531 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 MTERF2Q49AM1 385 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 SPRED2Q7Z698 418 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 SLC17A8Q8NDX2 589 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 SUGCTQ9HAC7 445 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 PADI3Q9ULW8 664 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 AKT3Q9Y243 479 aa34.54■■■■□ 3.12
CMTM4-204ENST00000563952 DDX11L8A8MPP1 907 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 RFXAPO00287 272 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 STBD1O95210 358 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 CD2BP2O95400 341 aaKnown RBP34.53■■■■□ 3.12
CMTM4-204ENST00000563952 TMOD1P28289 359 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 TBC1D8BQ0IIM8 1120 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 FBXO18Q8NFZ0 1043 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 MAP7D2Q96T17 732 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 SH2D3AQ9BRG2 576 aa34.53■■■■□ 3.12
CMTM4-204ENST00000563952 NIFKQ9BYG3 293 aaKnown RBP34.53■■■■□ 3.12
CMTM4-204ENST00000563952 ENPP3O14638 875 aa34.52■■■■□ 3.12
CMTM4-204ENST00000563952 NEMFO60524 1076 aa34.52■■■■□ 3.12
CMTM4-204ENST00000563952 GNL2Q13823 731 aaKnown RBP34.52■■■■□ 3.12
CMTM4-204ENST00000563952 IL27Q8NEV9 243 aa34.52■■■■□ 3.12
CMTM4-204ENST00000563952 YME1L1Q96TA2 773 aa34.52■■■■□ 3.12
CMTM4-204ENST00000563952 LINC01553A4QN01 128 aa34.51■■■■□ 3.12
CMTM4-204ENST00000563952 EPOPA6NHQ4 379 aa34.51■■■■□ 3.12
CMTM4-204ENST00000563952 QARSP47897 775 aaKnown RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 HTRA4P83105 476 aaPredicted RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 NFX1Q12986 1120 aaKnown RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 TARBP2Q15633 366 aaKnown RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 TMX3Q96JJ7 454 aa34.51■■■■□ 3.12
CMTM4-204ENST00000563952 OSMRQ99650 979 aa34.51■■■■□ 3.12
CMTM4-204ENST00000563952 FOXP1Q9H334 677 aaPredicted RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 MTUS1Q9ULD2 1270 aa34.51■■■■□ 3.12
CMTM4-204ENST00000563952 NOC2LQ9Y3T9 749 aaKnown RBP34.51■■■■□ 3.12
CMTM4-204ENST00000563952 CRYBB1P53674 252 aaPredicted RBP34.5■■■■□ 3.11
CMTM4-204ENST00000563952 EPHA7Q15375 998 aa34.5■■■■□ 3.11
CMTM4-204ENST00000563952 LINC01465Q8N7H1 131 aa34.5■■■■□ 3.11
CMTM4-204ENST00000563952 TMEM40Q8WWA1 233 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms