RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GPC5P78333 572 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 KLRC3Q07444 240 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 HTR4Q13639 388 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 CABP7Q86V35 215 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 MIGA1Q8NAN2 632 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 USP26Q9BXU7 913 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 CELSR2Q9HCU4 2923 aa12.77□□□□□ -0.36
HDGFL3-204ENST00000563790 PDCD11Q14690 1871 aaKnown RBP12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 A0A087WV48 116 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 ALAS1P13196 640 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 CYP7A1P22680 504 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 EDNRBP24530 442 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 ADCY1Q08828 1119 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 IER2Q9BTL4 223 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 CHRDQ9H2X0 955 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 SMOC1Q9H4F8 434 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 VPS45Q9NRW7 570 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 PCDHGA5Q9Y5G8 931 aa12.77□□□□□ -0.37
HDGFL3-204ENST00000563790 ABCA7Q8IZY2 2146 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 MTORP42345 2549 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 C17orf102A2RUQ5 167 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 CHURC1-FNTBB4DL54 471 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 CHRNA1P02708 482 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 GP1BBP13224 206 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 FNTBP49356 437 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 CSRP3P50461 194 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 CCR3P51677 355 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 PDE4DQ08499 809 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 LPIN1Q14693 890 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 KRTAP21-3Q3LHN1 58 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 CEP68Q76N32 757 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 RTN4RL1Q86UN2 441 aaPredicted RBP12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 FAM181AQ8N9Y4 354 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 STAMQ92783 540 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 GLG1Q92896 1179 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 MYH7P12883 1935 aa12.76□□□□□ -0.37
HDGFL3-204ENST00000563790 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 TCEAL6Q6IPX3 200 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 CHST3Q7LGC8 479 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 CHCHD4Q8N4Q1 142 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 WDR6Q9NNW5 1121 aaKnown RBP12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 MCM9Q9NXL9 1143 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 DKK4Q9UBT3 224 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
HDGFL3-204ENST00000563790 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 LAG3P18627 525 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 MPLP40238 635 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 GPCPD1Q9NPB8 672 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 TYW1Q9NV66 732 aaKnown RBP12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 KIF26AQ9ULI4 1882 aaPredicted RBP12.74□□□□□ -0.37
HDGFL3-204ENST00000563790 OTOGQ6ZRI0 2925 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 CLUHO75153 1309 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 LAMP2P13473 410 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 SCG2P13521 617 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 RDXP35241 583 aaKnown RBP12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 PPM1AP35813 382 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 KRT17Q04695 432 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 PPTC7Q8NI37 304 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 MPHOSPH6Q99547 160 aaKnown RBP12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 FTHL17Q9BXU8 183 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 CWH43Q9H720 699 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 ANKMY1Q9P2S6 941 aa12.73□□□□□ -0.37
HDGFL3-204ENST00000563790 PDZD2O15018 2839 aa12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 PRORYQ9H606 182 aa12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 MRPS17Q9Y2R5 130 aaKnown RBP12.72□□□□□ -0.37
HDGFL3-204ENST00000563790 LNP1A1A4G5 178 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 TBKBP1A7MCY6 615 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 CYP2D6P10635 497 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 PFKPQ01813 784 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms