RNA–Protein interactions for RNA: ENST00000563545.1

CHTF18-214, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 5

Gene CHTF18, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-214ENST00000563545 KHSRPQ92945 711 aaKnown RBP eCLIP25.24■■□□□ 1.63
CHTF18-214ENST00000563545 TMX1Q9H3N1 280 aa25.24■■□□□ 1.63
CHTF18-214ENST00000563545 GINS2Q9Y248 185 aa25.24■■□□□ 1.63
CHTF18-214ENST00000563545 MRPL42Q9Y6G3 142 aaKnown RBP25.24■■□□□ 1.63
CHTF18-214ENST00000563545 GRXCR2A6NFK2 248 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 ZBTB42B2RXF5 422 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 REC8O95072 547 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 NFX1Q12986 1120 aaKnown RBP25.23■■□□□ 1.63
CHTF18-214ENST00000563545 PUS10Q3MIT2 529 aaKnown RBP25.23■■□□□ 1.63
CHTF18-214ENST00000563545 PRR16Q569H4 304 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 CKAP2LQ8IYA6 745 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 BICD2Q8TD16 824 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 PLVAPQ9BX97 442 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 SLC26A6Q9BXS9 759 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 RNF26Q9BY78 433 aaPredicted RBP25.23■■□□□ 1.63
CHTF18-214ENST00000563545 CDHR5Q9HBB8 845 aa25.23■■□□□ 1.63
CHTF18-214ENST00000563545 IFNAR1P17181 557 aa25.22■■□□□ 1.63
CHTF18-214ENST00000563545 PAN2Q504Q3 1202 aaKnown RBP25.22■■□□□ 1.63
CHTF18-214ENST00000563545 SMAP1Q8IYB5 467 aaPredicted RBP25.22■■□□□ 1.63
CHTF18-214ENST00000563545 CCDC148Q8NFR7 591 aa25.22■■□□□ 1.63
CHTF18-214ENST00000563545 ERVK-5Q9HDB9 667 aa25.22■■□□□ 1.63
CHTF18-214ENST00000563545 CLDND1Q9NY35 253 aa25.22■■□□□ 1.63
CHTF18-214ENST00000563545 TCEAL9Q9UHQ7 104 aa25.22■■□□□ 1.63
CHTF18-214ENST00000563545 NOC2LQ9Y3T9 749 aaKnown RBP25.22■■□□□ 1.63
CHTF18-214ENST00000563545 MAFBQ9Y5Q3 323 aaPredicted RBP25.22■■□□□ 1.63
CHTF18-214ENST00000563545 FNDC1Q4ZHG4 1894 aaPredicted RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 RPS6KA5O75582 802 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 PSAPP07602 524 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 PDIA3P30101 505 aaKnown RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 CIITAP33076 1130 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 CCT2P78371 535 aaKnown RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 TRMT1LQ7Z2T5 733 aaKnown RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 NCOA5Q9HCD5 579 aaKnown RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 ALG13Q9NP73 1137 aaKnown RBP25.21■■□□□ 1.63
CHTF18-214ENST00000563545 VPS54Q9P1Q0 977 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 LRFN2Q9ULH4 789 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 PCDHA10Q9Y5I2 948 aa25.21■■□□□ 1.63
CHTF18-214ENST00000563545 NCK2O43639 380 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 MGEA5O60502 916 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 CSPG5O95196 566 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 C22orf31O95567 290 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 MMP1P03956 469 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 IBSPP21815 317 aaPredicted RBP25.2■■□□□ 1.62
CHTF18-214ENST00000563545 GATMP50440 423 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 EVCP57679 992 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 GJD3Q8N144 294 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 TMEM40Q8WWA1 233 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 P2RX5Q93086 422 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 PPP1R16BQ96T49 567 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 GABBR1Q9UBS5 961 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 PLAGL2Q9UPG8 496 aa25.2■■□□□ 1.62
CHTF18-214ENST00000563545 SARSP49591 514 aaKnown RBP25.19■■□□□ 1.62
CHTF18-214ENST00000563545 HYAL1Q12794 435 aa25.19■■□□□ 1.62
CHTF18-214ENST00000563545 ODR4Q5SWX8 454 aa25.19■■□□□ 1.62
CHTF18-214ENST00000563545 LENG9Q96B70 501 aa25.19■■□□□ 1.62
CHTF18-214ENST00000563545 LRFN3Q9BTN0 628 aa25.19■■□□□ 1.62
CHTF18-214ENST00000563545 ST3GAL5Q9UNP4 418 aa25.19■■□□□ 1.62
CHTF18-214ENST00000563545 ITGB1P05556 798 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 SSTR3P32745 418 aaPredicted RBP25.18■■□□□ 1.62
CHTF18-214ENST00000563545 LTBRP36941 435 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 KIZQ2M2Z5 673 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 NAALADL2Q58DX5 795 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 FAM43BQ6ZT52 329 aaPredicted RBP25.18■■□□□ 1.62
CHTF18-214ENST00000563545 RUFY3Q7L099 469 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 ADAM2Q99965 735 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 SAMM50Q9Y512 469 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 PCDHB7Q9Y5E2 793 aa25.18■■□□□ 1.62
CHTF18-214ENST00000563545 PLXNA4Q9HCM2 1894 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 PI4K2BG5E9Z4 385 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 EDIL3O43854 480 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 VTNP04004 478 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 CRYBB1P53674 252 aaPredicted RBP25.17■■□□□ 1.62
CHTF18-214ENST00000563545 CAMK1Q14012 370 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 TOB2Q14106 344 aaPredicted RBP25.17■■□□□ 1.62
CHTF18-214ENST00000563545 CTC1Q2NKJ3 1217 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 TMEM31Q5JXX7 168 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 METTL13Q8N6R0 699 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 OSMRQ99650 979 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 SH3GLB2Q9NR46 395 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 FAM50BQ9Y247 325 aa25.17■■□□□ 1.62
CHTF18-214ENST00000563545 DENND3A2RUS2 1198 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 WDR64B1ANS9 1081 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 GPR182O15218 404 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 MSH4O15457 936 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 DNAJB1P25685 340 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 GTF2F1P35269 517 aaKnown RBP eCLIP25.16■■□□□ 1.62
CHTF18-214ENST00000563545 NLRP5P59047 1200 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 FAM228AQ86W67 206 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 KLHL23Q8NBE8 558 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 SPPL3Q8TCT6 385 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 FAM167AQ96KS9 214 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 IGFLR1Q9H665 355 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 ZSWIM6Q9HCJ5 1215 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 RGS18Q9NS28 235 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 C1orf112Q9NSG2 853 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 CEP131Q9UPN4 1083 aa25.16■■□□□ 1.62
CHTF18-214ENST00000563545 GPR32O75388 356 aa25.15■■□□□ 1.62
CHTF18-214ENST00000563545 USP11P51784 963 aa25.15■■□□□ 1.62
CHTF18-214ENST00000563545 SLC24A5Q71RS6 500 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms