RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TBC1D22BQ9NU19 505 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 TMOD4Q9NZQ9 345 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 ARMCX3Q9UH62 379 aaPredicted RBP21.03■□□□□ 0.96
SMPD3-203ENST00000563226 SNCAIPQ9Y6H5 919 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 OAZ1P54368 228 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 VGLL4Q14135 290 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 ODR4Q5SWX8 454 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 CACNA2D4Q7Z3S7 1137 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 MTERF4Q7Z6M4 381 aaKnown RBP21.03■□□□□ 0.96
SMPD3-203ENST00000563226 MNS1Q8NEH6 495 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 SEL1LQ9UBV2 794 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 SPDYE16A6NNV3 312 aaPredicted RBP21.02■□□□□ 0.96
SMPD3-203ENST00000563226 ADM5C9JUS6 153 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 QARSP47897 775 aaKnown RBP21.02■□□□□ 0.96
SMPD3-203ENST00000563226 KRT83P78385 493 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 PPP2R3AQ06190 1150 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 KIAA1328Q86T90 577 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 CCDC42Q96M95 316 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 HAUS4Q9H6D7 363 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 CEP72Q9P209 647 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 LOC285556D6RIA3 1793 aa21.02■□□□□ 0.96
SMPD3-203ENST00000563226 NR3C2P08235 984 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 EIF4A3P38919 411 aaKnown RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 RARRES1P49788 294 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 POLR2FP61218 127 aaKnown RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 CCDC122Q5T0U0 273 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 VSIG10LQ86VR7 867 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 JAKMIP2Q96AA8 810 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 EDEM3Q9BZQ6 932 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 PEX10O60683 326 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 TFRCP02786 760 aaKnown RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 CCND2P30279 289 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 DCAF17Q5H9S7 520 aaPredicted RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 TRMT1LQ7Z2T5 733 aaKnown RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 TEX13BQ9BXU2 312 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 GANQ9H2C0 597 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 SPON1Q9HCB6 807 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
SMPD3-203ENST00000563226 MYO1AQ9UBC5 1043 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 PCDHB13Q9Y5F0 798 aa21.01■□□□□ 0.95
SMPD3-203ENST00000563226 CTAGE9A4FU28 777 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 SLC16A3O15427 465 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 TLR2O60603 784 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 RPL13P26373 211 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 KIF11P52732 1056 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 PLS1Q14651 629 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 HGSNATQ68CP4 663 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 DPY19L2P1Q6NXN4 242 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 CYP39A1Q9NYL5 469 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 RNF181Q9P0P0 153 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 DBR1Q9UK59 544 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 DUSP10Q9Y6W6 482 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 ATP2A1O14983 1001 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 USO1O60763 962 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 RGS20O76081 388 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 AFPP02771 609 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 EPB41P11171 864 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 ACTN1P12814 892 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 YWHABP31946 246 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 TREML2Q5T2D2 321 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 UTP14CQ5TAP6 766 aaKnown RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 BORCS6Q96GS4 357 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 NAPGQ99747 312 aaPredicted RBP21■□□□□ 0.95
SMPD3-203ENST00000563226 STRA6Q9BX79 667 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 TELO2Q9Y4R8 837 aa21■□□□□ 0.95
SMPD3-203ENST00000563226 UBE4BO95155 1302 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 PPP1R37O75864 691 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 LYPLA2O95372 231 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 XRCC5P13010 732 aaKnown RBP20.99■□□□□ 0.95
SMPD3-203ENST00000563226 SLC9A1P19634 815 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 SH3D19Q5HYK7 790 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 FBXO38Q6PIJ6 1188 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 ZNF662Q6ZS27 426 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 SLC35C1Q96A29 364 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 ACAD9Q9H845 621 aa20.99■□□□□ 0.95
SMPD3-203ENST00000563226 ADARB2Q9NS39 739 aaKnown RBP20.99■□□□□ 0.95
SMPD3-203ENST00000563226 CGNQ9P2M7 1197 aaKnown RBP20.99■□□□□ 0.95
SMPD3-203ENST00000563226 WDR64B1ANS9 1081 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 BACH1O14867 736 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 IPO7O95373 1038 aaKnown RBP20.98■□□□□ 0.95
SMPD3-203ENST00000563226 TCERG1LQ5VWI1 586 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 PLA2G4FQ68DD2 849 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 INPP4AQ96PE3 977 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-203ENST00000563226 AGPAT3Q9NRZ7 376 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 EFCAB8A8MWE9 144 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 VAV2P52735 878 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 KRT76Q01546 638 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 NFIL3Q16649 462 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 ASTE1Q2TB18 679 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-203ENST00000563226 XRRA1Q6P2D8 792 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 NSUN6Q8TEA1 469 aaKnown RBP20.98■□□□□ 0.95
SMPD3-203ENST00000563226 UBXN4Q92575 508 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 GPRASP2Q96D09 838 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 CDC23Q9UJX2 597 aa20.98■□□□□ 0.95
SMPD3-203ENST00000563226 K7ENM7 598 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 LCA5LO95447 670 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 JAK3P52333 1124 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 C4orf19Q8IY42 314 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 EPC1Q9H2F5 836 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms