RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 VPS37CA5D8V6 355 aaPredicted RBP15.22■□□□□ 0.03
SHF-210ENST00000561239 STX6O43752 255 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 ZNF862O60290 1169 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 MARCH6O60337 910 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
SHF-210ENST00000561239 MBTPS1Q14703 1052 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 ZNF174Q15697 407 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 MTHFD1LQ6UB35 978 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 RUFY4Q6ZNE9 571 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 USP38Q8NB14 1042 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 DBF4BQ8NFT6 615 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 CDX2Q99626 313 aaPredicted RBP15.22■□□□□ 0.03
SHF-210ENST00000561239 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 SQORQ9Y6N5 450 aa15.22■□□□□ 0.03
SHF-210ENST00000561239 MAGEB2O15479 319 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 CHMP2AO43633 222 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 TLL1O43897 1013 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 DKC1O60832 514 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHF-210ENST00000561239 STBD1O95210 358 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
SHF-210ENST00000561239 AMHP03971 560 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 KLRC1P26715 233 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
SHF-210ENST00000561239 UGCGQ16739 394 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 PPP2R2DQ66LE6 453 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 MIER3Q7Z3K6 550 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
SHF-210ENST00000561239 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.03
SHF-210ENST00000561239 ZBTB42B2RXF5 422 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 LAD1O00515 517 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 CHRNA1P02708 482 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 PRPHP41219 470 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 RABGGTBP53611 331 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 MGAT3Q09327 533 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 PTGDRQ13258 359 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 EPHA7Q15375 998 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 ZNF710Q8N1W2 664 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 GAS2L1Q99501 681 aaPredicted RBP15.2■□□□□ 0.02
SHF-210ENST00000561239 HSD17B14Q9BPX1 270 aa15.2■□□□□ 0.02
SHF-210ENST00000561239 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
SHF-210ENST00000561239 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
SHF-210ENST00000561239 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
SHF-210ENST00000561239 OATP04181 439 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 FOSL2P15408 326 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 TMOD1P28289 359 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 TXKP42681 527 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHF-210ENST00000561239 ATP2C1P98194 919 aaPredicted RBP15.19■□□□□ 0.02
SHF-210ENST00000561239 GRIN2CQ14957 1233 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 ODR4Q5SWX8 454 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 TSHZ1Q6ZSZ6 1077 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 TRAPPC12Q8WVT3 735 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
SHF-210ENST00000561239 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 WDR81Q562E7 1941 aa15.19■□□□□ 0.02
SHF-210ENST00000561239 GJB5O95377 273 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 P4HBP07237 508 aaKnown RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 GHRP10912 638 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 PRKCEQ02156 737 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 BECN1Q14457 450 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 TARBP2Q15633 366 aaKnown RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 IL17AQ16552 155 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 FBXO47Q5MNV8 452 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 MYLIPQ8WY64 445 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 CEP89Q96ST8 783 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 RAD9AQ99638 391 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 FTHL17Q9BXU8 183 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 WRAP73Q9P2S5 460 aaPredicted RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 INSL6Q9Y581 213 aa15.18■□□□□ 0.02
SHF-210ENST00000561239 MORC2Q9Y6X9 1032 aaPredicted RBP15.18■□□□□ 0.02
SHF-210ENST00000561239 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 POTEMA6NI47 508 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 SLITRK3O94933 977 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 LYPLA2O95372 231 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 CA3P07451 260 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 QARSP47897 775 aaKnown RBP15.17■□□□□ 0.02
SHF-210ENST00000561239 PSMC5P62195 406 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 DEFB103AP81534 67 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 PKP1Q13835 747 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 PDIA5Q14554 519 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 LPIN1Q14693 890 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 XKR3Q5GH77 459 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
SHF-210ENST00000561239 NCAPH2Q6IBW4 605 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
SHF-210ENST00000561239 C4orf19Q8IY42 314 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 MYOCDQ8IZQ8 938 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 METTL13Q8N6R0 699 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
SHF-210ENST00000561239 EIF2AK1Q9BQI3 630 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms