RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TMEM40Q8WWA1 233 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 CELF4Q9BZC1 486 aaKnown RBP18.06■□□□□ 0.48
LMX1B-204ENST00000561065 C22orf23Q9BZE7 217 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 TMX1Q9H3N1 280 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 UNC45AQ9H3U1 944 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 CDHR5Q9HBB8 845 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 GABBR1Q9UBS5 961 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 ADGRA3Q8IWK6 1321 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 FNDC1Q4ZHG4 1894 aaPredicted RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 WDR64B1ANS9 1081 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 CHMP2AO43633 222 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 SEC24BO95487 1268 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 PSAPP07602 524 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 MRPS5P82675 430 aaKnown RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 SKIV2LQ15477 1246 aaKnown RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 TMEM266Q2M3C6 531 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 ZNF484Q5JVG2 852 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 B3GNT9Q6UX72 402 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 TRMT1LQ7Z2T5 733 aaKnown RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 CRIPAKQ8N1N5 446 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 BBXQ8WY36 941 aaPredicted RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
LMX1B-204ENST00000561065 MBOAT7Q96N66 472 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 PPP1R16BQ96T49 567 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 PADI3Q9ULW8 664 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 SQORQ9Y6N5 450 aa18.05■□□□□ 0.48
LMX1B-204ENST00000561065 SLC37A4O43826 429 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 PSMD10O75832 226 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 KCNQ1P51787 676 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 Q4G0T1 1027 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 LRCH2Q5VUJ6 765 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 GALNT17Q6IS24 598 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 CKAP2LQ8IYA6 745 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 LINC01465Q8N7H1 131 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 ETNPPLQ8TBG4 499 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 WASF1Q92558 559 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
LMX1B-204ENST00000561065 RIT2Q99578 217 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 DISC1Q9NRI5 854 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 LMCD1Q9NZU5 365 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
LMX1B-204ENST00000561065 CYP3A7-CYP3A51PA0A087WV96 503 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 M0QZ92 97 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 MGEA5O60502 916 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 GAS7O60861 476 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 CYP3A7P24462 503 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 CLCN3P51790 818 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 NEK4P51957 841 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 PRKCEQ02156 737 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 PAK2Q13177 524 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 INF2Q27J81 1249 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 TMEM192Q8IY95 271 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 ADAMTS19Q8TE59 1207 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 ZNF689Q96CS4 500 aaPredicted RBP18.03■□□□□ 0.48
LMX1B-204ENST00000561065 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
LMX1B-204ENST00000561065 ERVK-5Q9HDB9 667 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 TCEAL9Q9UHQ7 104 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 GINS2Q9Y248 185 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 NOC2LQ9Y3T9 749 aaKnown RBP18.03■□□□□ 0.48
LMX1B-204ENST00000561065 SAMM50Q9Y512 469 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 NCOR1O75376 2440 aa18.03■□□□□ 0.48
LMX1B-204ENST00000561065 ARID2Q68CP9 1835 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 VTNP04004 478 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 OATP04181 439 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.48
LMX1B-204ENST00000561065 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
LMX1B-204ENST00000561065 ME3Q16798 604 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 EARS2Q5JPH6 523 aaKnown RBP18.02■□□□□ 0.48
LMX1B-204ENST00000561065 NME8Q8N427 588 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 NECAB1Q8N987 351 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 SAMD11Q96NU1 681 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 NECAB3Q96P71 396 aaPredicted RBP18.02■□□□□ 0.48
LMX1B-204ENST00000561065 OSMRQ99650 979 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 PLXNA4Q9HCM2 1894 aa18.02■□□□□ 0.48
LMX1B-204ENST00000561065 FAM205CA6NFA0 338 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 H3BNC9 293 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 GPR32O75388 356 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 DGKIO75912 1065 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 BMP1P13497 986 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 GATMP50440 423 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 KIZQ2M2Z5 673 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 MOXD1Q6UVY6 613 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 FAM228AQ86W67 206 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 LRRC71Q8N4P6 559 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 GTF3C6Q969F1 213 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 FAM167AQ96KS9 214 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 FTHL17Q9BXU8 183 aa18.01■□□□□ 0.47
LMX1B-204ENST00000561065 TMEM150BA6NC51 233 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 STBD1O95210 358 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 CTNNB1P35222 781 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 JAK3P52333 1124 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 GPM6BQ13491 265 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 NPAS4Q8IUM7 802 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms