RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ATG7O95352 703 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 GTF2A2P52657 109 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 ACTR2P61160 394 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 FSTL1Q12841 308 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 ADAM9Q13443 819 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 PWP2Q15269 919 aaKnown RBP14.24□□□□□ -0.13
SNX1-211ENST00000560829 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 FAM178BQ8IXR5 827 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 LCTP09848 1927 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 USP27XA6NNY8 438 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 PES1O00541 588 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 CCP110O43303 1012 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 TGFB3P10600 412 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 NR2F2P24468 414 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 NMT1P30419 496 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ERVK-24P63145 666 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 SP2Q02086 613 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 SYCP1Q15431 976 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ODR4Q5SWX8 454 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 NYAP1Q6ZVC0 841 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ANO5Q75V66 913 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 CPLX3Q8WVH0 158 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 FGD4Q96M96 766 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 POLD4Q9HCU8 107 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ABHD10Q9NUJ1 306 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 LARSQ9P2J5 1176 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 CAPN11Q9UMQ6 739 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ZMYM2Q9UBW7 1377 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 A0A1W2PQJ5 194 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 TTC26A0AVF1 554 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 RNF225M0QZC1 329 aaPredicted RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 BACH1O14867 736 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 TGFB1I1O43294 461 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ZNF862O60290 1169 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 RPL13P26373 211 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 ALCAMQ13740 583 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 MIS18BP1Q6P0N0 1132 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 OTUD6AQ7L8S5 288 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 DRC1Q96MC2 740 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 CCDC43Q96MW1 224 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
SNX1-211ENST00000560829 ST6GALNAC4Q9H4F1 302 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 SIK3Q9Y2K2 1263 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
SNX1-211ENST00000560829 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
SNX1-211ENST00000560829 PLS3P13797 630 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 KRT9P35527 623 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 KCTD2Q14681 263 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
SNX1-211ENST00000560829 FRMD5Q7Z6J6 570 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 CCDC60Q8IWA6 550 aaPredicted RBP14.22□□□□□ -0.13
SNX1-211ENST00000560829 C2orf69Q8N8R5 385 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 MORC4Q8TE76 937 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 TMEM174Q8WUU8 243 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 PPP1R13BQ96KQ4 1090 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 MMP19Q99542 508 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 DNAJC7Q99615 494 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 FAM184BQ9ULE4 1060 aa14.22□□□□□ -0.13
SNX1-211ENST00000560829 SYNGAP1Q96PV0 1343 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 IGKV6D-21A0A0A0MT36 114 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 CCL15-CCL14A0A0B4J2E2 113 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 BTBD19C9JJ37 291 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 PDHXO00330 501 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 SOCS7O14512 581 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 USO1O60763 962 aaKnown RBP14.21□□□□□ -0.13
SNX1-211ENST00000560829 ZBTB48P10074 688 aaPredicted RBP14.21□□□□□ -0.13
SNX1-211ENST00000560829 CYP2C8P10632 490 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 PPP2R3AQ06190 1150 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 KCNA1Q09470 495 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 CCL15Q16663 113 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 XKR9Q5GH70 373 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 UTP14CQ5TAP6 766 aaKnown RBP14.21□□□□□ -0.13
SNX1-211ENST00000560829 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 SLC17A8Q8NDX2 589 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 BRI3BPQ8WY22 251 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.13
SNX1-211ENST00000560829 LUC7L2Q9Y383 392 aaKnown RBP14.21□□□□□ -0.13
SNX1-211ENST00000560829 TELO2Q9Y4R8 837 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 LOXHD1Q8IVV2 1947 aa14.21□□□□□ -0.13
SNX1-211ENST00000560829 NR3C1P04150 777 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 UBA1P22314 1058 aaKnown RBP14.21□□□□□ -0.14
SNX1-211ENST00000560829 TERF1P54274 439 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 NPEPPSP55786 919 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 MYBPC2Q14324 1141 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 NEDD9Q14511 834 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 ZC2HC1CQ53FD0 456 aaPredicted RBP14.21□□□□□ -0.14
SNX1-211ENST00000560829 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 SEPT14Q6ZU15 432 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 TMTC1Q8IUR5 882 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms