RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 NLRX1Q86UT6 975 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 CCDC105Q8IYK2 499 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ZDHHC14Q8IZN3 488 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 CASP10Q92851 521 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 NECTIN4Q96NY8 510 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ADAM2Q99965 735 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ERVK-5Q9HDB9 667 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 NGRNQ9NPE2 291 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ENTPD7Q9NQZ7 604 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 RGS18Q9NS28 235 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 NOC2LQ9Y3T9 749 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 HCFC2Q9Y5Z7 792 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 MYH15Q9Y2K3 1946 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 MEIS2O14770 477 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 AOC1P19801 751 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 SDSP20132 328 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 KRT76Q01546 638 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 GRM4Q14833 912 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 CES5AQ6NT32 575 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 KANK3Q6NY19 840 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 XRRA1Q6P2D8 792 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 SLC24A5Q71RS6 500 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 CYB5R4Q7L1T6 521 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 NME8Q8N427 588 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 FLCNQ8NFG4 579 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 FEZF2Q8TBJ5 459 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 GPRASP2Q96D09 838 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 UBAC1Q9BSL1 405 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 KRT23Q9C075 422 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 PUF60Q9UHX1 559 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-217ENST00000560521 FRYLO94915 3013 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 PATJQ8NI35 1801 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 C2orf71A6NGG8 1288 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 CLASP2O75122 1294 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 RPS6KA5O75582 802 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 LMNAP02545 664 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 FGFR1P11362 822 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 ITGB5P18084 799 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 LAG3P18627 525 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 PDE4AP27815 886 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 PBX3P40426 434 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 MTHFRP42898 656 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 FAM189BP81408 668 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 MTHFD1LQ6UB35 978 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 KCNT2Q6UVM3 1135 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 KIAA2013Q8IYS2 634 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 C12orf76Q8N812 135 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 MRPL43Q8N983 215 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 DTWD2Q8NBA8 298 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 RILPL2Q969X0 211 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 SENP2Q9HC62 589 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 C1orf112Q9NSG2 853 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 PKD2L1Q9P0L9 805 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
RABGGTA-217ENST00000560521 DENND3A2RUS2 1198 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 EOMESO95936 686 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 PUM1Q14671 1186 aaKnown RBP eCLIP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 KIAA1841Q6NSI8 718 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 TDRD5Q8NAT2 981 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 KCNG4Q8TDN1 519 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 CDHR1Q96JP9 859 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 CASD1Q96PB1 797 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 RTP3Q9BQQ7 232 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 CNNM2Q9H8M5 875 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 ATP6V0A4Q9HBG4 840 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 RNF19AQ9NV58 838 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 RNF216Q9NWF9 866 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 TMEM161AQ9NX61 479 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 GINS2Q9Y248 185 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 UBIAD1Q9Y5Z9 338 aa10.27□□□□□ -0.77
RABGGTA-217ENST00000560521 KLRC1P26715 233 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 KRT17Q04695 432 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 TROAPQ12815 778 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 DSC3Q14574 896 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 ATAT1Q5SQI0 421 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 FAM43BQ6ZT52 329 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 PLPPR4Q7Z2D5 763 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 POTEDQ86YR6 584 aa10.26□□□□□ -0.77
RABGGTA-217ENST00000560521 KIAA0319LQ8IZA0 1049 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms