RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 CCSER1Q9C0I3 900 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 PDLIM7Q9NR12 457 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 TRMT13Q9NUP7 481 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 SEPT9Q9UHD8 586 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 KCNG1Q9UIX4 513 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 RCOR1Q9UKL0 485 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 DNM3Q9UQ16 869 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 CLIC4Q9Y696 253 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 SQORQ9Y6N5 450 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 MYH11P35749 1972 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 CUTAO60888 179 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 DGAT1O75907 488 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 CYP2C9P11712 490 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 ATP4AP20648 1035 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 KLRC1P26715 233 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 TARBP2Q15633 366 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 MFSD5Q6N075 450 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 USP38Q8NB14 1042 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 TCP11Q8WWU5 503 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 MAP7D2Q96T17 732 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 TIPINQ9BVW5 301 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 CYP26B1Q9NR63 512 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 RGL1Q9NZL6 768 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
RABGGTA-215ENST00000560207 ASAP2O43150 1006 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 TREHO43280 583 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 MAFO75444 373 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 SELPP16109 830 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 CYP4A11Q02928 519 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 CEBPZQ03701 1054 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 PPIGQ13427 754 aaKnown RBP eCLIP13.45□□□□□ -0.263e-8■■■□□ 18.5
RABGGTA-215ENST00000560207 PKP1Q13835 747 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 FAM173BQ6P4H8 233 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 ANO5Q75V66 913 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 CABP7Q86V35 215 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 MCPH1Q8NEM0 835 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 RASSF8Q8NHQ8 419 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 PRDM5Q9NQX1 630 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 FBXO2Q9UK22 296 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
RABGGTA-215ENST00000560207 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 STBD1O95210 358 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 C22orf31O95567 290 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 ME1P48163 572 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 IGBP1P78318 339 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 IL17AQ16552 155 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 UGCGQ16739 394 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 FAM26DQ5JW98 314 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 MARCH8Q5T0T0 291 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 LRRC27Q9C0I9 530 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 TFIP11Q9UBB9 837 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 STK17AQ9UEE5 414 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
RABGGTA-215ENST00000560207 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 RSPH10B2B2RC85 870 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 ZBTB42B2RXF5 422 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 EFCAB14O75071 495 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 MED24O75448 989 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 EYA4O95677 639 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 CKBP12277 381 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 NCLP19338 710 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 SCP2P22307 547 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 THPOP40225 353 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 RARRES1P49788 294 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 FPGSQ05932 587 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 MXD4Q14582 209 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 PCBP1Q15365 356 aaKnown RBP eCLIP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 ADALQ6DHV7 355 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 EFCAB12Q6NXP0 572 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 METTL13Q8N6R0 699 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 CUEDC2Q9H467 287 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
RABGGTA-215ENST00000560207 CEP290O15078 2479 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 PHLPP2Q6ZVD8 1323 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms