RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 KIAA0319LQ8IZA0 1049 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 PGBD1Q96JS3 809 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 ADAM2Q99965 735 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 TMX1Q9H3N1 280 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 TLE6Q9H808 572 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 ERVK-5Q9HDB9 667 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 ZNF302Q9NR11 478 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 TCEAL9Q9UHQ7 104 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 NLRC5Q86WI3 1866 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CNTNAP5Q8WYK1 1306 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TBKBP1A7MCY6 615 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 GOLGA8BA8MQT2 603 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 DDX39AO00148 427 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 IPO5O00410 1097 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 LINC01565O15544 149 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TBX10O75333 385 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CYP3A4P08684 503 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 IBSPP21815 317 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 DNAJB1P25685 340 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 NRIP1P48552 1158 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CRYBB1P53674 252 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 RCAN1P53805 252 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 FUT2Q10981 343 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 COASYQ13057 564 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 COL9A3Q14050 684 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 PKN1Q16512 942 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TMEM266Q2M3C6 531 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 RBM23Q86U06 439 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CCDC12Q8WUD4 166 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 EDAQ92838 391 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 MSLNLQ96KJ4 702 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 CDCA3Q99618 268 aaPredicted RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 TMEM260Q9NX78 707 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 PUF60Q9UHX1 559 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 MUTYHQ9UIF7 546 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 BRPF3Q9ULD4 1205 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
HDDC3-204ENST00000559834 NOC2LQ9Y3T9 749 aaKnown RBP10.42□□□□□ -0.74
HDDC3-204ENST00000559834 KLF18A0A0U1RQI7 1052 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 MAGEB2O15479 319 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 CCNE2O96020 404 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 PSAPP07602 524 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 SRGAP2BP0DMP2 458 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 TMOD1P28289 359 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 GNA11P29992 359 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 JAKMIP3Q5VZ66 844 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 ZNF746Q6NUN9 644 aaPredicted RBP10.41□□□□□ -0.74
HDDC3-204ENST00000559834 SMAP1Q8IYB5 467 aaPredicted RBP10.41□□□□□ -0.74
HDDC3-204ENST00000559834 THNSL1Q8IYQ7 743 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 METTL13Q8N6R0 699 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 ZNF577Q9BSK1 485 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 ELAC1Q9H777 363 aaKnown RBP10.41□□□□□ -0.74
HDDC3-204ENST00000559834 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 ATP6V0A4Q9HBG4 840 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 C6orf50Q9HD87 102 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 TLR9Q9NR96 1032 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 NAP1L2Q9ULW6 460 aaPredicted RBP10.41□□□□□ -0.74
HDDC3-204ENST00000559834 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 PCDHA10Q9Y5I2 948 aa10.41□□□□□ -0.74
HDDC3-204ENST00000559834 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 C9IYK1 514 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FAM86B1E9PN63 330 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 DHX15O43143 795 aaKnown RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 HOXA2O43364 376 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FGF18O76093 207 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FAM86B2P0C5J1 330 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 ZSCAN20P17040 1043 aaPredicted RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 LAG3P18627 525 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 GATMP50440 423 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FAM189BP81408 668 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 KRT17Q04695 432 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 KIZQ2M2Z5 673 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 BMP2KLQ5H9B9 411 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FAM102BQ5T8I3 360 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 HFE2Q6ZVN8 426 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 BMP8AQ7Z5Y6 402 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 ADGRD2Q7Z7M1 963 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 CCDC60Q8IWA6 550 aaPredicted RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 FBXL18Q96ME1 805 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 TCEANC2Q96MN5 208 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 PRRX2Q99811 253 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 PHF7Q9BWX1 381 aaPredicted RBP10.4□□□□□ -0.74
HDDC3-204ENST00000559834 ZMYND12Q9H0C1 365 aa10.4□□□□□ -0.74
HDDC3-204ENST00000559834 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms