RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CLUL1Q15846 466 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 PAN2Q504Q3 1202 aaKnown RBP14.91□□□□□ -0.02
TPM1-220ENST00000559556 FAM160B1Q5W0V3 765 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 DHX32Q7L7V1 743 aaKnown RBP14.91□□□□□ -0.02
TPM1-220ENST00000559556 KLHL23Q8NBE8 558 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 SPPL3Q8TCT6 385 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 PPP2R3CQ969Q6 453 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 MSLNLQ96KJ4 702 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 ERVK-5Q9HDB9 667 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
TPM1-220ENST00000559556 TMEM260Q9NX78 707 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 CD207Q9UJ71 328 aa14.91□□□□□ -0.02
TPM1-220ENST00000559556 V9GY48 417 aaPredicted RBP14.91□□□□□ -0.02
TPM1-220ENST00000559556 RIF1Q5UIP0 2472 aaKnown RBP14.9□□□□□ -0.02
TPM1-220ENST00000559556 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 GOLGA8BA8MQT2 603 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 ZBTB42B2RXF5 422 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 FAM86B1E9PN63 330 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
TPM1-220ENST00000559556 MGEA5O60502 916 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 EYA4O95677 639 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 FAM86B2P0C5J1 330 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 KLRC1P26715 233 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 CDC27P30260 824 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 GATMP50440 423 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 CSPP1Q1MSJ5 1256 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
TPM1-220ENST00000559556 UPF3BQ9BZI7 483 aaKnown RBP14.9□□□□□ -0.02
TPM1-220ENST00000559556 DOCK8Q8NF50 2099 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 TRIP11Q15643 1979 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 KLF18A0A0U1RQI7 1052 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 ESYT2A0FGR8 921 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 DDX39AO00148 427 aaKnown RBP14.89□□□□□ -0.03
TPM1-220ENST00000559556 IPO5O00410 1097 aaKnown RBP14.89□□□□□ -0.03
TPM1-220ENST00000559556 BACH1O14867 736 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 CSPG5O95196 566 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 CYP3A4P08684 503 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 ZNF76P36508 570 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 NDUFV1P49821 464 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 KRT32Q14532 448 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 PFKFB3Q16875 520 aaPredicted RBP14.89□□□□□ -0.03
TPM1-220ENST00000559556 ZNF484Q5JVG2 852 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 PDXDC2PQ6P474 469 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 ADGRD2Q7Z7M1 963 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 PLA2G4DQ86XP0 818 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 KIAA0319LQ8IZA0 1049 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 EFHBQ8N7U6 833 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 SMRP1Q8NCR6 262 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 POF1BQ8WVV4 589 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 TMEM40Q8WWA1 233 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 IGFLR1Q9H665 355 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 ZNF302Q9NR11 478 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
TPM1-220ENST00000559556 LRFN2Q9ULH4 789 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 NOC2LQ9Y3T9 749 aaKnown RBP14.89□□□□□ -0.03
TPM1-220ENST00000559556 DMDP11532 3685 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 PLXNA3P51805 1871 aa14.89□□□□□ -0.03
TPM1-220ENST00000559556 FAM186AA6NE01 2351 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 GLP2RO95838 553 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 ATP4AP20648 1035 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 SETQ01105 290 aaPredicted RBP14.88□□□□□ -0.03
TPM1-220ENST00000559556 UBE3AQ05086 875 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 NFX1Q12986 1120 aaKnown RBP14.88□□□□□ -0.03
TPM1-220ENST00000559556 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
TPM1-220ENST00000559556 ODR4Q5SWX8 454 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 UIMC1Q96RL1 719 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 ZMYND12Q9H0C1 365 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 CDHR5Q9HBB8 845 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 RGS18Q9NS28 235 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 C1orf112Q9NSG2 853 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 CLEC1BQ9P126 229 aa14.88□□□□□ -0.03
TPM1-220ENST00000559556 DENND3A2RUS2 1198 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 C9IYK1 514 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 C22orf31O95567 290 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 NRIP1P48552 1158 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 COASYQ13057 564 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 JAKMIP3Q5VZ66 844 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 MIS18BP1Q6P0N0 1132 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 SLC24A5Q71RS6 500 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 REXO1Q8N1G1 1221 aaKnown RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 ADAM2Q99965 735 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 KCNH6Q9H252 994 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 TBC1D22BQ9NU19 505 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 ST3GAL5Q9UNP4 418 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 GINS2Q9Y248 185 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 PCDHB7Q9Y5E2 793 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 PCDHB12Q9Y5F1 795 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 MAFBQ9Y5Q3 323 aaPredicted RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 ZFHX2Q9C0A1 2572 aaPredicted RBP14.87□□□□□ -0.03
TPM1-220ENST00000559556 DOCK6Q96HP0 2047 aa14.87□□□□□ -0.03
TPM1-220ENST00000559556 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 GPR182O15218 404 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms