RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SMIM35A0A1B0GVV1 85 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 PSMD10O75832 226 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 GJB5O95377 273 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 GCFC2P16383 781 aaKnown RBP14.2□□□□□ -0.14
LRRC28-214ENST00000559433 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
LRRC28-214ENST00000559433 PRKCEQ02156 737 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 NR5A1Q13285 461 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 TSHZ1Q6ZSZ6 1077 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 MIER3Q7Z3K6 550 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 MICALL1Q8N3F8 863 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 NAP1L4Q99733 375 aaKnown RBP14.2□□□□□ -0.14
LRRC28-214ENST00000559433 CEP131Q9UPN4 1083 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
LRRC28-214ENST00000559433 NLRC5Q86WI3 1866 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 LCHNA4D1U4 455 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 CCNT1O60563 726 aaKnown RBP14.19□□□□□ -0.14
LRRC28-214ENST00000559433 ARHGEF15O94989 841 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 UPP2O95045 317 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 C22orf31O95567 290 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 MMP1P03956 469 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 OATP04181 439 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 TAP1Q03518 808 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 UGCGQ16739 394 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
LRRC28-214ENST00000559433 PPP4R3AQ6IN85 833 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 NME8Q8N427 588 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 RDM1Q8NG50 284 aa14.19□□□□□ -0.14
LRRC28-214ENST00000559433 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
LRRC28-214ENST00000559433 CELF4Q9BZC1 486 aaKnown RBP14.19□□□□□ -0.14
LRRC28-214ENST00000559433 UPF2Q9HAU5 1272 aaKnown RBP14.19□□□□□ -0.14
LRRC28-214ENST00000559433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-214ENST00000559433 ZNF862O60290 1169 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 MARCH6O60337 910 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 CD52P31358 61 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 ADGRE1Q14246 886 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 SKIV2LQ15477 1246 aaKnown RBP14.18□□□□□ -0.14
LRRC28-214ENST00000559433 KRT40Q6A162 431 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 DIS3L2Q8IYB7 885 aaKnown RBP14.18□□□□□ -0.14
LRRC28-214ENST00000559433 METTL13Q8N6R0 699 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 TNFRSF25Q93038 417 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 FAM20AQ96MK3 541 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 YME1L1Q96TA2 773 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 LLPHQ9BRT6 129 aaKnown RBP14.18□□□□□ -0.14
LRRC28-214ENST00000559433 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-214ENST00000559433 NRBP2Q9NSY0 501 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 TRANK1O15050 2925 aa14.18□□□□□ -0.14
LRRC28-214ENST00000559433 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-214ENST00000559433 PAK2Q13177 524 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 RABEP1Q15276 862 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 B3GNT9Q6UX72 402 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 KIAA0319LQ8IZA0 1049 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 TGS1Q96RS0 853 aaKnown RBP14.17□□□□□ -0.14
LRRC28-214ENST00000559433 PPP1R16BQ96T49 567 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
LRRC28-214ENST00000559433 KCNMB3Q9NPA1 279 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-214ENST00000559433 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 GINS2Q9Y248 185 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 SQORQ9Y6N5 450 aa14.17□□□□□ -0.14
LRRC28-214ENST00000559433 KDM3AQ9Y4C1 1321 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 RALGAPA2Q2PPJ7 1873 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 UNC80Q8N2C7 3258 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 ARID2Q68CP9 1835 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 TTC3P53804 2025 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 EPOPA6NHQ4 379 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 RFXAPO00287 272 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 TBX3O15119 743 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 MAGEB2O15479 319 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 CLCN3P51790 818 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 PPP2R5CQ13362 524 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 SAFBQ15424 915 aaKnown RBP eCLIP14.16□□□□□ -0.14
LRRC28-214ENST00000559433 SPRED2Q7Z698 418 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 BANK1Q8NDB2 785 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 TOP1MTQ969P6 601 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 C8orf76Q96K31 380 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 MTUS1Q9ULD2 1270 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 COL4A6Q14031 1691 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 PRUNE2Q8WUY3 3088 aa14.16□□□□□ -0.14
LRRC28-214ENST00000559433 LINC01553A4QN01 128 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 EML1O00423 815 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 ST18O60284 1047 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
LRRC28-214ENST00000559433 VTNP04004 478 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 TMOD1P28289 359 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
LRRC28-214ENST00000559433 HTRA4P83105 476 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-214ENST00000559433 KIZQ2M2Z5 673 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 TMEM266Q2M3C6 531 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 ODR4Q5SWX8 454 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 EFCAB12Q6NXP0 572 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 LRRC71Q8N4P6 559 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 FAM184AQ8NB25 1140 aa14.15□□□□□ -0.14
LRRC28-214ENST00000559433 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms