RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TIGD5Q53EQ6 642 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 METTL13Q8N6R0 699 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 NSUN3Q9H649 340 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 GABBR1Q9UBS5 961 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 NOC2LQ9Y3T9 749 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 SAMM50Q9Y512 469 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 VTNP04004 478 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 SLC26A2P50443 739 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 KIZQ2M2Z5 673 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 LEXMQ3ZCV2 418 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 PTCRAQ6ISU1 281 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 TEX2Q8IWB9 1127 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 ZNF668Q96K58 619 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 RNF26Q9BY78 433 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 UPF3BQ9BZI7 483 aaKnown RBP23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 IGFLR1Q9H665 355 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 CLDND1Q9NY35 253 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 TCEAL9Q9UHQ7 104 aa23.24■■□□□ 1.31
TSPAN3-206ENST00000559373 CHMP2AO43633 222 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 IFNAR1P17181 557 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 CLUL1Q15846 466 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 CRIPAKQ8N1N5 446 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 NME8Q8N427 588 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 FBXL16Q8N461 479 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 CLP1Q92989 425 aaKnown RBP23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 LENG9Q96B70 501 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 AIFM3Q96NN9 605 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 OSMRQ99650 979 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 FTHL17Q9BXU8 183 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 TBC1D22BQ9NU19 505 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 SQORQ9Y6N5 450 aa23.23■■□□□ 1.31
TSPAN3-206ENST00000559373 C5orf67F2Z3F1 127 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 RPS6KA5O75582 802 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 NLRP5P59047 1200 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 SETQ01105 290 aaPredicted RBP23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 ZNF484Q5JVG2 852 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 ZNF746Q6NUN9 644 aaPredicted RBP23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 NPAS4Q8IUM7 802 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 C11orf84Q9BUA3 381 aaPredicted RBP23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 ZSWIM6Q9HCJ5 1215 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 ERVK-5Q9HDB9 667 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 LRFN2Q9ULH4 789 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 PCDHA10Q9Y5I2 948 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 MAFBQ9Y5Q3 323 aaPredicted RBP23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 COL1A2P08123 1366 aa23.22■■□□□ 1.31
TSPAN3-206ENST00000559373 MSH4O15457 936 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 C22orf31O95567 290 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 RPLP2P05387 115 aaKnown RBP23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 RB1P06400 928 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 PSAPP07602 524 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 DNAJB1P25685 340 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 CLCN3P51790 818 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 NEK9Q8TD19 979 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 BBXQ8WY36 941 aaPredicted RBP23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 ADAM2Q99965 735 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 HCSTQ9UBK5 93 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 ST3GAL5Q9UNP4 418 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 KDM3AQ9Y4C1 1321 aa23.21■■□□□ 1.31
TSPAN3-206ENST00000559373 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 GRXCR2A6NFK2 248 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 LINC01565O15544 149 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 CIITAP33076 1130 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 DLX2Q07687 328 aaPredicted RBP23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 SSRP1Q08945 709 aaKnown RBP23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 HYAL1Q12794 435 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 CAMK1Q14012 370 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 UGCGQ16739 394 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 FAM102BQ5T8I3 360 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 FAM178BQ8IXR5 827 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 LRRC71Q8N4P6 559 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 CCDC148Q8NFR7 591 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 BICD2Q8TD16 824 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 PABPC5Q96DU9 382 aaKnown RBP23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 PLAGL2Q9UPG8 496 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 CYP46A1Q9Y6A2 500 aa23.2■■□□□ 1.3
TSPAN3-206ENST00000559373 DENND3A2RUS2 1198 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 STAG3L1P0CL83 205 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 SSTR3P32745 418 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 LTBRP36941 435 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 EVCP57679 992 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 FAM228AQ86W67 206 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 CMTR2Q8IYT2 770 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 KLHL23Q8NBE8 558 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 TBCKQ8TEA7 893 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 RWDD3Q9Y3V2 267 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 PCDHB7Q9Y5E2 793 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 PCDHGC5Q9Y5F6 944 aa23.19■■□□□ 1.3
TSPAN3-206ENST00000559373 ZNF862O60290 1169 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 GPR32O75388 356 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 ITGB1P05556 798 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 IRS1P35568 1242 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 SARSP49591 514 aaKnown RBP23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 MCTP2Q6DN12 878 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 EFCAB12Q6NXP0 572 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 SMAP1Q8IYB5 467 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 UNC45AQ9H3U1 944 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 DISC1Q9NRI5 854 aa23.18■■□□□ 1.3
TSPAN3-206ENST00000559373 AKT3Q9Y243 479 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms