RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 P4HBP07237 508 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 GHRP10912 638 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 FOSL2P15408 326 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 ATP2B1P20020 1258 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 QARSP47897 775 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 TRAPPC10P48553 1259 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 WDR5P61964 334 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 MRPS6P82932 125 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 GUCY1B3Q02153 619 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 PRKCEQ02156 737 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 ORC2Q13416 577 aaPredicted RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 PLEKHG4Q58EX7 1191 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 XKR3Q5GH77 459 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 FAM26DQ5JW98 314 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 MCTP1Q6DN14 999 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 NCAPH2Q6IBW4 605 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 EFCAB12Q6NXP0 572 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 RUFY4Q6ZNE9 571 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 TSHZ1Q6ZSZ6 1077 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 OTUD6AQ7L8S5 288 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 NOSTRINQ8IVI9 506 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 HERC6Q8IVU3 1022 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 MYOCDQ8IZQ8 938 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 ERMNQ8TAM6 284 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 SLC7A3Q8WY07 619 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 WNT8BQ93098 351 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 GJA10Q969M2 543 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 TMX3Q96JJ7 454 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 CCDC43Q96MW1 224 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 MBOAT7Q96N66 472 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 SCLT1Q96NL6 688 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 YME1L1Q96TA2 773 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 CDX2Q99626 313 aaPredicted RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 RAD9AQ99638 391 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 CELF4Q9BZC1 486 aaKnown RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 RAB34Q9BZG1 259 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 UNC45AQ9H3U1 944 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 ZSWIM4Q9H7M6 989 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 TTC12Q9H892 705 aaPredicted RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 SUGCTQ9HAC7 445 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 KCNMB3Q9NPA1 279 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 SEPT9Q9UHD8 586 aaPredicted RBP4.91□□□□□ -1.62
SNX1-205ENST00000559339 SMC3Q9UQE7 1217 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 AKT3Q9Y243 479 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 STXBP5LQ9Y2K9 1186 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 INSL6Q9Y581 213 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 TRPV2Q9Y5S1 764 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 CDY2AQ9Y6F7 541 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 IGSF9BQ9UPX0 1349 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 DENND3A2RUS2 1198 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 EDIL3O43854 480 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 DTNBO60941 627 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 RPS6KA5O75582 802 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 CA3P07451 260 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 STAG3L1P0CL83 205 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 ATP4AP20648 1035 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 PDCP20941 246 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 YWHABP31946 246 aaKnown RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 MCM7P33993 719 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 PBX2P40425 430 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TXKP42681 527 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 RABGGTBP53611 331 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 CRYBB1P53674 252 aaPredicted RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 POLGP54098 1239 aaPredicted RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 TMEM62Q0P6H9 643 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 ST3GAL1Q11201 340 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 NFX1Q12986 1120 aaKnown RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 PAK2Q13177 524 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 MBTPS1Q14703 1052 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 GPNMBQ14956 572 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 EPHA7Q15375 998 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 KIZQ2M2Z5 673 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TMEM266Q2M3C6 531 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 MTERF2Q49AM1 385 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 RILPL1Q5EBL4 403 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 EARS2Q5JPH6 523 aaKnown RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 FBXO47Q5MNV8 452 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 LARP1BQ659C4 914 aaKnown RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 HAUS3Q68CZ6 603 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 FAM117BQ6P1L5 589 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TRAF7Q6Q0C0 670 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TPH2Q8IWU9 490 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 KIAA0319LQ8IZA0 1049 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 BANK1Q8NDB2 785 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 NEK9Q8TD19 979 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TRAPPC12Q8WVT3 735 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 NLRP7Q8WX94 980 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 HAS1Q92839 578 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TNFRSF25Q93038 417 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TOP1MTQ969P6 601 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 VWCEQ96DN2 955 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 ZBTB10Q96DT7 871 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 CEP170P1Q96L14 293 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 LXNQ9BS40 222 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 NIFKQ9BYG3 293 aaKnown RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 BACH2Q9BYV9 841 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 NKX2-4Q9H2Z4 354 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 TTYH1Q9H313 450 aaPredicted RBP4.9□□□□□ -1.63
SNX1-205ENST00000559339 PPME1Q9Y570 386 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms