RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 A0A087WWV3 80 aa21■□□□□ 0.95
CASC4-209ENST00000559222 CXCL10P02778 98 aa21■□□□□ 0.95
CASC4-209ENST00000559222 RFC2P35250 354 aa21■□□□□ 0.95
CASC4-209ENST00000559222 QARSP47897 775 aaKnown RBP21■□□□□ 0.95
CASC4-209ENST00000559222 CLCN3P51790 818 aa21■□□□□ 0.95
CASC4-209ENST00000559222 PSMC5P62195 406 aa21■□□□□ 0.95
CASC4-209ENST00000559222 ORC2Q13416 577 aaPredicted RBP21■□□□□ 0.95
CASC4-209ENST00000559222 TARBP2Q15633 366 aaKnown RBP21■□□□□ 0.95
CASC4-209ENST00000559222 FAM26DQ5JW98 314 aa21■□□□□ 0.95
CASC4-209ENST00000559222 TAF2Q6P1X5 1199 aa21■□□□□ 0.95
CASC4-209ENST00000559222 LRRC71Q8N4P6 559 aa21■□□□□ 0.95
CASC4-209ENST00000559222 FTOQ9C0B1 505 aaKnown RBP eCLIP21■□□□□ 0.95
CASC4-209ENST00000559222 CDY2AQ9Y6F7 541 aa21■□□□□ 0.95
CASC4-209ENST00000559222 LAMA3Q16787 3333 aa21■□□□□ 0.95
CASC4-209ENST00000559222 DDX11L8A8MPP1 907 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 GRXCR1A8MXD5 290 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 SLITRK3O94933 977 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 FGBP02675 491 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 P4HBP07237 508 aaKnown RBP20.99■□□□□ 0.95
CASC4-209ENST00000559222 NPEPPSP55786 919 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 DRP2Q13474 957 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 XKR3Q5GH77 459 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 RPAINQ86UA6 219 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 KIAA0319LQ8IZA0 1049 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 LINC01465Q8N7H1 131 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 HERVK_113Q902F9 699 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 CDHR5Q9HBB8 845 aa20.99■□□□□ 0.95
CASC4-209ENST00000559222 SMIM35A0A1B0GVV1 85 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 CAND2O75155 1236 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 MED24O75448 989 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 MRPS6P82932 125 aaKnown RBP20.98■□□□□ 0.95
CASC4-209ENST00000559222 LRIT3Q3SXY7 679 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 TPH2Q8IWU9 490 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
CASC4-209ENST00000559222 HSD17B14Q9BPX1 270 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 NIFKQ9BYG3 293 aaKnown RBP20.98■□□□□ 0.95
CASC4-209ENST00000559222 NRBP2Q9NSY0 501 aa20.98■□□□□ 0.95
CASC4-209ENST00000559222 BMP2KQ9NSY1 1161 aaPredicted RBP20.98■□□□□ 0.95
CASC4-209ENST00000559222 PP2D1A8MPX8 630 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 VTNP04004 478 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 SPATA31C1P0DKV0 1188 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 GHRP10912 638 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 PDCP20941 246 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 MKRN4PQ13434 485 aaPredicted RBP20.97■□□□□ 0.95
CASC4-209ENST00000559222 METTL13Q8N6R0 699 aa20.97■□□□□ 0.95
CASC4-209ENST00000559222 ZNF668Q96K58 619 aaPredicted RBP20.97■□□□□ 0.95
CASC4-209ENST00000559222 ZBBXA8MT70 800 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 STX6O43752 255 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
CASC4-209ENST00000559222 PKP1Q13835 747 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 LPIN1Q14693 890 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 ECM1Q16610 540 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 FOXD4L5Q5VV16 416 aaPredicted RBP20.96■□□□□ 0.95
CASC4-209ENST00000559222 EFCAB12Q6NXP0 572 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 TMCO2Q7Z6W1 182 aaPredicted RBP20.96■□□□□ 0.95
CASC4-209ENST00000559222 C4orf19Q8IY42 314 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 DBF4BQ8NFT6 615 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 FOXD4L4Q8WXT5 416 aaPredicted RBP20.96■□□□□ 0.95
CASC4-209ENST00000559222 TNPO1Q92973 898 aaKnown RBP20.96■□□□□ 0.95
CASC4-209ENST00000559222 TRPV2Q9Y5S1 764 aa20.96■□□□□ 0.95
CASC4-209ENST00000559222 LAMA2P24043 3122 aaKnown RBP20.95■□□□□ 0.94
CASC4-209ENST00000559222 PFKMP08237 780 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 YWHABP31946 246 aaKnown RBP20.95■□□□□ 0.94
CASC4-209ENST00000559222 FXR2P51116 673 aaKnown RBP eCLIP20.95■□□□□ 0.94
CASC4-209ENST00000559222 PLEKHG4Q58EX7 1191 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 FBXO47Q5MNV8 452 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 CNKSR3Q6P9H4 555 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 POTEGQ6S5H5 508 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 BRAPQ7Z569 592 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 TMEM40Q8WWA1 233 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 ZSWIM4Q9H7M6 989 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 AGO3Q9H9G7 860 aaKnown RBP20.95■□□□□ 0.94
CASC4-209ENST00000559222 CYP26B1Q9NR63 512 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 CEP131Q9UPN4 1083 aa20.95■□□□□ 0.94
CASC4-209ENST00000559222 HSP90AA1P07900 732 aaKnown RBP20.94■□□□□ 0.94
CASC4-209ENST00000559222 CDC25AP30304 524 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 PBX2P40425 430 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 DEFB103AP81534 67 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 TBC1D8BQ0IIM8 1120 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 RSPH3Q86UC2 560 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 CATSPER3Q86XQ3 398 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 PIGOQ8TEQ8 1089 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 SUGCTQ9HAC7 445 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 GINS2Q9Y248 185 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 CLIC4Q9Y696 253 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 SZT2Q5T011 3432 aa20.94■□□□□ 0.94
CASC4-209ENST00000559222 IGKV6-21A0A0C4DH24 114 aa20.93■□□□□ 0.94
CASC4-209ENST00000559222 GRIN1Q05586 938 aa20.93■□□□□ 0.94
CASC4-209ENST00000559222 KIZQ2M2Z5 673 aa20.93■□□□□ 0.94
CASC4-209ENST00000559222 IGSF22Q8N9C0 903 aa20.93■□□□□ 0.94
CASC4-209ENST00000559222 CEP170P1Q96L14 293 aa20.93■□□□□ 0.94
CASC4-209ENST00000559222 CELF4Q9BZC1 486 aaKnown RBP20.93■□□□□ 0.94
CASC4-209ENST00000559222 MAGEB2O15479 319 aa20.92■□□□□ 0.94
CASC4-209ENST00000559222 GPR32O75388 356 aa20.92■□□□□ 0.94
CASC4-209ENST00000559222 LYPLA2O95372 231 aa20.92■□□□□ 0.94
CASC4-209ENST00000559222 PARNO95453 639 aaKnown RBP20.92■□□□□ 0.94
CASC4-209ENST00000559222 CD52P31358 61 aa20.92■□□□□ 0.94
CASC4-209ENST00000559222 PRPHP41219 470 aa20.92■□□□□ 0.94
CASC4-209ENST00000559222 RABGGTBP53611 331 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms