RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 GCNT4Q9P109 453 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 NOC2LQ9Y3T9 749 aaKnown RBP18.12■□□□□ 0.49
SPG11-215ENST00000559193 SAMM50Q9Y512 469 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 CLIC2O15247 247 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 MSH4O15457 936 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 ANXA13P27216 316 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 CRKP46108 304 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 ATP6V1G3Q96LB4 118 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 AP1M1Q9BXS5 423 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 METTL14Q9HCE5 456 aaKnown RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 PLAAQ9Y263 795 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 PGRMC1O00264 195 aaKnown RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 DDX3XO00571 662 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPG11-215ENST00000559193 GCNT3O95395 438 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 NR1D1P20393 614 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 POLD1P28340 1107 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 SLFN11Q7Z7L1 901 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 EIF1ADQ8N9N8 165 aaKnown RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 C1orf131Q8NDD1 294 aaKnown RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 OLIG1Q8TAK6 271 aa18.11■□□□□ 0.49
SPG11-215ENST00000559193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPG11-215ENST00000559193 CALR3Q96L12 384 aaKnown RBP18.11■□□□□ 0.49
SPG11-215ENST00000559193 ZMYM2Q9UBW7 1377 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 SPDYE3A6NKU9 549 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 GUCY1A3Q02108 690 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 HLTFQ14527 1009 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPG11-215ENST00000559193 FBXO11Q86XK2 927 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 CYP2W1Q8TAV3 490 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 IKZF4Q9H2S9 585 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 STXBP5LQ9Y2K9 1186 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 EML1O00423 815 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 OPLAHO14841 1288 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 TGFB1I1O43294 461 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 TBCAO75347 108 aaKnown RBP18.1■□□□□ 0.49
SPG11-215ENST00000559193 H2AFZP0C0S5 128 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 RPL13P26373 211 aaKnown RBP18.1■□□□□ 0.49
SPG11-215ENST00000559193 CIITAP33076 1130 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 MMP14P50281 582 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 ICA1Q05084 483 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 CUL1Q13616 776 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 MCTP2Q6DN12 878 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 H2AFVQ71UI9 128 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPG11-215ENST00000559193 PROCA1Q8NCQ7 364 aaPredicted RBP18.1■□□□□ 0.49
SPG11-215ENST00000559193 BORCS6Q96GS4 357 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■■□ 19.3
SPG11-215ENST00000559193 NEUROG2Q9H2A3 272 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 NRXN2Q9P2S2 1712 aa18.1■□□□□ 0.49
SPG11-215ENST00000559193 A0A0A6YYK5 440 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 SART1O43290 800 aaKnown RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 EYA4O95677 639 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 LSP1P33241 339 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 UAP1Q16222 522 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 CEP85LQ5SZL2 805 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 PEX26Q7Z412 305 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 MAATS1Q7Z4T9 603 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 EIF2AK1Q9BQI3 630 aaKnown RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 DDX47Q9H0S4 455 aaKnown RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 RABGAP1Q9Y3P9 1069 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 PCDHB13Q9Y5F0 798 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 GTPBP10A4D1E9 387 aaKnown RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 TMCO5BA8MYB1 307 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 F5H6K3 240 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 ZEB2O60315 1214 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 HSD17B3P37058 310 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 KLRC3Q07444 240 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 RASGEF1CQ8N431 466 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 LNX1Q8TBB1 728 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 ZDHHC15Q96MV8 337 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
SPG11-215ENST00000559193 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 FAM198AQ9UFP1 575 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 STK24Q9Y6E0 443 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
SPG11-215ENST00000559193 SFI1A8K8P3 1242 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 GFPT2O94808 682 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 NDUFB10O96000 172 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 FOSP01100 380 aaPredicted RBP18.08■□□□□ 0.49
SPG11-215ENST00000559193 ITGA4P13612 1032 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 ITGB3BPQ13352 177 aaPredicted RBP18.08■□□□□ 0.49
SPG11-215ENST00000559193 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.49
SPG11-215ENST00000559193 VPS36Q86VN1 386 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 U2AF1L4Q8WU68 220 aaKnown RBP18.08■□□□□ 0.49
SPG11-215ENST00000559193 TMBIM4Q9HC24 238 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 KCNQ5Q9NR82 932 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 OLFML3Q9NRN5 406 aa18.08■□□□□ 0.49
SPG11-215ENST00000559193 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.49
SPG11-215ENST00000559193 H0YGN5 161 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 LIG3P49916 1009 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 SYDE2Q5VT97 1194 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 RINT1Q6NUQ1 792 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 TATDN1Q6P1N9 297 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms