RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 HSPA1LP34931 641 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 SLMAPQ14BN4 828 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 CYB5D1Q6P9G0 228 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 LRIG3Q6UXM1 1119 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 SAAL1Q96ER3 474 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 TSC22D3Q99576 134 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 PACSIN1Q9BY11 444 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 TECPR2O15040 1411 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 ARL1P40616 181 aaPredicted RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 AARSP49588 968 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP3-210ENST00000559192 GTF2IP78347 998 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 ODR4Q5SWX8 454 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 KIF2BQ8N4N8 673 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 USP38Q8NB14 1042 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 AENQ8WTP8 325 aaKnown RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 IMPG2Q9BZV3 1241 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 HSD3B7Q9H2F3 369 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 DNAJC12Q9UKB3 198 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 PVALEFA0A1B0GWK0 134 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 PDE2AO00408 941 aaPredicted RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 CSF1RP07333 972 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 POLD1P28340 1107 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 DRP2Q13474 957 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 CTTNQ14247 550 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 SLC18A3Q16572 532 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 NBPF9Q3BBW0 867 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 FAM102BQ5T8I3 360 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 ARHGEF18Q6ZSZ5 1173 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 RBM17Q96I25 401 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 TXLNGQ9NUQ3 528 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TYW1Q9NV66 732 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 DBR1Q9UK59 544 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 PEAK1Q9H792 1746 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 SART1O43290 800 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 DLATP10515 647 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 MX2P20592 715 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 CASP7P55210 303 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 NAB2Q15742 525 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 PKN1Q16512 942 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 DGKHQ86XP1 1220 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 PROM2Q8N271 834 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 PRPF31Q8WWY3 499 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 RILPQ96NA2 401 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 C7orf25Q9BPX7 421 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 CARD10Q9BWT7 1032 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 MAK16Q9BXY0 300 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 ZC3H12CQ9C0D7 883 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 DNAI2Q9GZS0 605 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 GLT8D2Q9H1C3 349 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 POTEFA5A3E0 1075 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 ERVV-1B6SEH8 477 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 SORBS3O60504 671 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 POTEIP0CG38 1075 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TEX2Q8IWB9 1127 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 GUF1Q8N442 669 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 FBXL16Q8N461 479 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 CCDC89Q8N998 374 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 MAIP1Q8WWC4 291 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TGS1Q96RS0 853 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 PLA2G12BQ9BX93 195 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 STK24Q9Y6E0 443 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TCP11X1B4DZS4 312 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 I3L4J1 428 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 NDC80O14777 642 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 STRN3Q13033 797 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 ASPRV1Q53RT3 343 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 PALM2Q8IXS6 379 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 SCYL3Q8IZE3 742 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 CCHCR1Q8TD31 782 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 PIGOQ8TEQ8 1089 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 HAUS1Q96CS2 278 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 XPO6Q96QU8 1125 aaKnown RBP7.67□□□□□ -1.18
USP3-210ENST00000559192 MTA3Q9BTC8 594 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 ARHGAP20Q9P2F6 1191 aa7.67□□□□□ -1.18
USP3-210ENST00000559192 FAM208AQ9UK61 1670 aaKnown RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 RCCD1A6NED2 376 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 DIAPH2O60879 1101 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 NR3C1P04150 777 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 GCFC2P16383 781 aaKnown RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 MAPK4P31152 587 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 MSH2P43246 934 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 PHEXP78562 749 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 SRRM1Q8IYB3 904 aaKnown RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 RAPGEF5Q92565 580 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 RAB20Q9NX57 234 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 THEGQ9P2T0 379 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 ARHGAP42A6NI28 874 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 MYCLP12524 364 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 SMTNP53814 917 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 RCN2Q14257 317 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms