RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 FAM184AQ8NB25 1140 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 AFAP1L1Q8TED9 768 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 ZSCAN31Q96LW9 406 aaPredicted RBP10.9□□□□□ -0.66
SPG11-214ENST00000558989 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 TEKT3Q9BXF9 490 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 TBC1D22BQ9NU19 505 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
SPG11-214ENST00000558989 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 NBNO60934 754 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 LGR5O75473 907 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 MMP1P03956 469 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 TCTN1Q2MV58 587 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
SPG11-214ENST00000558989 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 NEK8Q86SG6 692 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 UNC45AQ9H3U1 944 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 CUEDC1Q9NWM3 386 aaPredicted RBP10.89□□□□□ -0.67
SPG11-214ENST00000558989 TUBE1Q9UJT0 475 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 NRCAMQ92823 1304 aa10.89□□□□□ -0.67
SPG11-214ENST00000558989 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 MYOGP15173 224 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 GPNMBQ14956 572 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 FAM117BQ6P1L5 589 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 MIER3Q7Z3K6 550 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 HERVK_113Q902F9 699 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 TBC1D32Q96NH3 1257 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 SH2D3AQ9BRG2 576 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 MTIF3Q9H2K0 278 aaKnown RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 PSAPP07602 524 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 ACTN1P12814 892 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 ATP4AP20648 1035 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 IBSPP21815 317 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 KRT76Q01546 638 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 UGCGQ16739 394 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 Q4G0T1 1027 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 MARCH8Q5T0T0 291 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 ZNF697Q5TEC3 545 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 ZNF746Q6NUN9 644 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 PLPPR4Q7Z2D5 763 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 SLC5A5Q92911 643 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 DISC1Q9NRI5 854 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
SPG11-214ENST00000558989 GINS2Q9Y248 185 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 PCDHA10Q9Y5I2 948 aa10.88□□□□□ -0.67
SPG11-214ENST00000558989 TLDC2A0PJX2 215 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 TMEM150BA6NC51 233 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 WNT7AO00755 349 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 SLC34A2O95436 690 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 DNAJB2P25686 324 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 HOXC8P31273 242 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 RFC2P35250 354 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 PTGDRQ13258 359 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
SPG11-214ENST00000558989 TMX3Q96JJ7 454 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 PBX4Q9BYU1 374 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 BACH2Q9BYV9 841 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPG11-214ENST00000558989 CDH23Q9H251 3354 aa10.87□□□□□ -0.67
SPG11-214ENST00000558989 CYP3A7-CYP3A51PA0A087WV96 503 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 IGKV6D-21A0A0A0MT36 114 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ANKRD33BA6NCL7 494 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 SOWAHDA6NJG2 315 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 PSMD10O75832 226 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 GHRP10912 638 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ATP2A2P16615 1042 aaKnown RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 CYP3A7P24462 503 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 KLRC1P26715 233 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 KCNJ6P48051 423 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ADAM17P78536 824 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 SMAD3P84022 425 aaKnown RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 SAFBQ15424 915 aaKnown RBP eCLIP10.86□□□□□ -0.67
SPG11-214ENST00000558989 RASIP1Q5U651 963 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 PHLDB3Q6NSJ2 640 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 SMAP1Q8IYB5 467 aaPredicted RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ETNPPLQ8TBG4 499 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 TNFRSF25Q93038 417 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 HBP1O60381 514 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 CHRNA1P02708 482 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 PFKMP08237 780 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
SPG11-214ENST00000558989 DEFB103AP81534 67 aa10.86□□□□□ -0.67
SPG11-214ENST00000558989 PRKCEQ02156 737 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms