RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PGK1P00558 417 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 C6orf222P0C671 652 aaPredicted RBP20.12■□□□□ 0.81
CLPX-203ENST00000558958 MARK3P27448 753 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 NPEPPSP55786 919 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 PLCB4Q15147 1175 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 NT5DC1Q5TFE4 455 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 C1orf186Q6ZWK4 172 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 BBXQ8WY36 941 aaPredicted RBP20.12■□□□□ 0.81
CLPX-203ENST00000558958 ANP32EQ9BTT0 268 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 BMP2KQ9NSY1 1161 aaPredicted RBP20.12■□□□□ 0.81
CLPX-203ENST00000558958 KCND2Q9NZV8 630 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
CLPX-203ENST00000558958 LOXHD1Q8IVV2 1947 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 MYADML2A6NDP7 307 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 H3BRB1 525 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 GNASQ5JWF2 1037 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 PADI6Q6TGC4 694 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 SMARCE1Q969G3 411 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 CEP170P1Q96L14 293 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 CCDC43Q96MW1 224 aaKnown RBP20.11■□□□□ 0.81
CLPX-203ENST00000558958 SH2D3AQ9BRG2 576 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 TUT1Q9H6E5 874 aaKnown RBP20.11■□□□□ 0.81
CLPX-203ENST00000558958 CYP26B1Q9NR63 512 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 KLRC4O43908 158 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 ASIC1P78348 528 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 TARBP2Q15633 366 aaKnown RBP20.11■□□□□ 0.81
CLPX-203ENST00000558958 LHX8Q68G74 356 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 FBXO46Q6PJ61 603 aaPredicted RBP20.11■□□□□ 0.81
CLPX-203ENST00000558958 KAT2BQ92831 832 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 GSDMAQ96QA5 445 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 RNPEPQ9H4A4 650 aa20.11■□□□□ 0.81
CLPX-203ENST00000558958 NPHP3-ACAD11A0A0J9YXS1 232 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 HBP1O60381 514 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 KPNA6O60684 536 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 F2P00734 622 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 RPN1P04843 607 aaKnown RBP20.1■□□□□ 0.81
CLPX-203ENST00000558958 CST5P28325 142 aaPredicted RBP20.1■□□□□ 0.81
CLPX-203ENST00000558958 GIT2Q14161 759 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
CLPX-203ENST00000558958 KLHDC9Q8NEP7 349 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 CEP89Q96ST8 783 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLPX-203ENST00000558958 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 PPME1Q9Y570 386 aa20.1■□□□□ 0.81
CLPX-203ENST00000558958 PVALEFA0A1B0GWK0 134 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 KRT18P05783 430 aaKnown RBP20.09■□□□□ 0.81
CLPX-203ENST00000558958 MYL3P08590 195 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 GUCY2CP25092 1073 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 PURAQ00577 322 aaKnown RBP20.09■□□□□ 0.81
CLPX-203ENST00000558958 MTERF2Q49AM1 385 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 REEP2Q9BRK0 252 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 MAN1B1Q9UKM7 699 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 TRPC6Q9Y210 931 aa20.09■□□□□ 0.81
CLPX-203ENST00000558958 ZBTB42B2RXF5 422 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 ZEB2O60315 1214 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 USO1O60763 962 aaKnown RBP20.08■□□□□ 0.81
CLPX-203ENST00000558958 DGAT1O75907 488 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 ZNF445P59923 1031 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 RAD51AP2Q09MP3 1159 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 KCNB1Q14721 858 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
CLPX-203ENST00000558958 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 UNC13DQ70J99 1090 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 PAK6Q9NQU5 681 aaPredicted RBP20.08■□□□□ 0.81
CLPX-203ENST00000558958 PDLIM7Q9NR12 457 aa20.08■□□□□ 0.81
CLPX-203ENST00000558958 FRMD3A2A2Y4 597 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 HAS3O00219 553 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 BIN1O00499 593 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 IDEP14735 1019 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
CLPX-203ENST00000558958 MTFR1Q15390 333 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 KMT5BQ4FZB7 885 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 ZNF484Q5JVG2 852 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 RNF180Q86T96 592 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 FUCA2Q9BTY2 467 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 TIPINQ9BVW5 301 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 DHX33Q9H6R0 707 aaKnown RBP20.07■□□□□ 0.8
CLPX-203ENST00000558958 RMND1Q9NWS8 449 aa20.07■□□□□ 0.8
CLPX-203ENST00000558958 RHOBTB3O94955 611 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 INSRRP14616 1297 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 RFC5P40937 340 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 PSEN2P49810 448 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 TYRO3Q06418 890 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 MORC3Q14149 939 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 MFSD10Q14728 455 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 LRRC41Q15345 812 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 KCNA10Q16322 511 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 KIAA0753Q2KHM9 967 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 CCDC65Q8IXS2 484 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 TRIML1Q8N9V2 468 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 MTG1Q9BT17 334 aaPredicted RBP20.06■□□□□ 0.8
CLPX-203ENST00000558958 KATNAL1Q9BW62 490 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 PANK4Q9NVE7 773 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 ODF2LQ9ULJ1 636 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
CLPX-203ENST00000558958 RSPH10B2B2RC85 870 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 RSPH10BP0C881 870 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms