RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 ERVK-21P61565 698 aa24.22■■□□□ 1.47
CRNDE-205ENST00000558952 PAK2Q13177 524 aa24.22■■□□□ 1.47
CRNDE-205ENST00000558952 TRIM29Q14134 588 aa24.22■■□□□ 1.47
CRNDE-205ENST00000558952 METTL13Q8N6R0 699 aa24.22■■□□□ 1.47
CRNDE-205ENST00000558952 NSUN7Q8NE18 718 aaKnown RBP24.22■■□□□ 1.47
CRNDE-205ENST00000558952 FTHL17Q9BXU8 183 aa24.22■■□□□ 1.47
CRNDE-205ENST00000558952 TSPYL2Q9H2G4 693 aaPredicted RBP24.22■■□□□ 1.47
CRNDE-205ENST00000558952 AGO3Q9H9G7 860 aaKnown RBP24.22■■□□□ 1.47
CRNDE-205ENST00000558952 MAGEB2O15479 319 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 CCNT1O60563 726 aaKnown RBP24.21■■□□□ 1.47
CRNDE-205ENST00000558952 PRKCEQ02156 737 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 PPP4R3AQ6IN85 833 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 SPRED2Q7Z698 418 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 KIAA0319LQ8IZA0 1049 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 ETNPPLQ8TBG4 499 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 SP7Q8TDD2 431 aaPredicted RBP24.21■■□□□ 1.47
CRNDE-205ENST00000558952 OXER1Q8TDS5 423 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 LIMCH1Q9UPQ0 1083 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 MTCH2Q9Y6C9 303 aa24.21■■□□□ 1.47
CRNDE-205ENST00000558952 CHD9Q3L8U1 2897 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 ENPP3O14638 875 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 SLC37A4O43826 429 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 MARCH6O60337 910 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 POU3F3P20264 500 aaPredicted RBP24.2■■□□□ 1.46
CRNDE-205ENST00000558952 GRB10Q13322 594 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 C8orf34Q49A92 452 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 ODR4Q5SWX8 454 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 PADI3Q9ULW8 664 aa24.2■■□□□ 1.46
CRNDE-205ENST00000558952 ZNF862O60290 1169 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 TMOD1P28289 359 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 GDPD5Q8WTR4 605 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 FAM20AQ96MK3 541 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 SAMD11Q96NU1 681 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 MAP7D2Q96T17 732 aa24.19■■□□□ 1.46
CRNDE-205ENST00000558952 JAK2O60674 1132 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 RPS6KA5O75582 802 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 NFX1Q12986 1120 aaKnown RBP24.18■■□□□ 1.46
CRNDE-205ENST00000558952 SKIV2LQ15477 1246 aaKnown RBP24.18■■□□□ 1.46
CRNDE-205ENST00000558952 UGCGQ16739 394 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 FBXO22Q8NEZ5 403 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 C17orf80Q9BSJ5 609 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 THEGQ9P2T0 379 aa24.18■■□□□ 1.46
CRNDE-205ENST00000558952 SEPT9Q9UHD8 586 aaPredicted RBP24.18■■□□□ 1.46
CRNDE-205ENST00000558952 MYH9P35579 1960 aaKnown RBP24.18■■□□□ 1.46
CRNDE-205ENST00000558952 MMP1P03956 469 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 FOSBP53539 338 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 NR5A1Q13285 461 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 TMEM266Q2M3C6 531 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 EFCAB12Q6NXP0 572 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 B3GNT9Q6UX72 402 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 FAM43BQ6ZT52 329 aaPredicted RBP24.17■■□□□ 1.46
CRNDE-205ENST00000558952 PPP1R16BQ96T49 567 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 SUGCTQ9HAC7 445 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 KCNMB3Q9NPA1 279 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 PRDM6Q9NQX0 595 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 AKT3Q9Y243 479 aa24.17■■□□□ 1.46
CRNDE-205ENST00000558952 COL4A4P53420 1690 aaPredicted RBP24.16■■□□□ 1.46
CRNDE-205ENST00000558952 TBX3O15119 743 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 BAG4O95429 457 aaKnown RBP24.16■■□□□ 1.46
CRNDE-205ENST00000558952 VTNP04004 478 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 CLCN3P51790 818 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 CRYBB1P53674 252 aaPredicted RBP24.16■■□□□ 1.46
CRNDE-205ENST00000558952 TBC1D8BQ0IIM8 1120 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 KIZQ2M2Z5 673 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 XKR3Q5GH77 459 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 FIBCD1Q8N539 461 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 LMCD1Q9NZU5 365 aa24.16■■□□□ 1.46
CRNDE-205ENST00000558952 COL4A6Q14031 1691 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 EYSQ5T1H1 3165 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 GPR182O15218 404 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 LPXNO60711 386 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 STAG3L1P0CL83 205 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 PPP2R5CQ13362 524 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 EARS2Q5JPH6 523 aaKnown RBP24.15■■□□□ 1.46
CRNDE-205ENST00000558952 KRT40Q6A162 431 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 CCDC83Q8IWF9 413 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 DIS3L2Q8IYB7 885 aaKnown RBP24.15■■□□□ 1.46
CRNDE-205ENST00000558952 ZNF710Q8N1W2 664 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 LRRC71Q8N4P6 559 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 ATXN2LQ8WWM7 1075 aaKnown RBP24.15■■□□□ 1.46
CRNDE-205ENST00000558952 LINC01599Q8WXQ3 324 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 ZSCAN31Q96LW9 406 aaPredicted RBP24.15■■□□□ 1.46
CRNDE-205ENST00000558952 OSMRQ99650 979 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 CDHR5Q9HBB8 845 aa24.15■■□□□ 1.46
CRNDE-205ENST00000558952 NOC2LQ9Y3T9 749 aaKnown RBP24.15■■□□□ 1.46
CRNDE-205ENST00000558952 ADGRA3Q8IWK6 1321 aa24.14■■□□□ 1.46
CRNDE-205ENST00000558952 DKC1O60832 514 aaKnown RBP eCLIP24.14■■□□□ 1.45
CRNDE-205ENST00000558952 PSMC5P62195 406 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 SAFBQ15424 915 aaKnown RBP eCLIP24.14■■□□□ 1.45
CRNDE-205ENST00000558952 MTERF2Q49AM1 385 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 EPC2Q52LR7 807 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 POTEDQ86YR6 584 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 NPAS4Q8IUM7 802 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 SLFN12Q8IYM2 578 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 BANK1Q8NDB2 785 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 ERVK-5Q9HDB9 667 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 VAV3Q9UKW4 847 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 LRFN2Q9ULH4 789 aa24.14■■□□□ 1.45
CRNDE-205ENST00000558952 MYO9BQ13459 2157 aa24.13■■□□□ 1.45
CRNDE-205ENST00000558952 DENND3A2RUS2 1198 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms