RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 SWSAP1Q6NVH7 229 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 GPBP1Q86WP2 473 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
GABRB3-213ENST00000557765 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
GABRB3-213ENST00000557765 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 GLG1Q92896 1179 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 PANK2Q9BZ23 570 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 UPF3AQ9H1J1 476 aaKnown RBP11.66□□□□□ -0.54
GABRB3-213ENST00000557765 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
GABRB3-213ENST00000557765 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-213ENST00000557765 NRCAMQ92823 1304 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 FSD2A1L4K1 749 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 KIAA0391O15091 583 aaKnown RBP11.65□□□□□ -0.54
GABRB3-213ENST00000557765 TBC1D8O95759 1140 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 TPM3P06753 285 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 RARBP10826 455 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CYP2B6P20813 491 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 TMOD1P28289 359 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 MYL5Q02045 173 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 PRKCEQ02156 737 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CTTNQ14247 550 aaKnown RBP11.65□□□□□ -0.54
GABRB3-213ENST00000557765 MCM6Q14566 821 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 NFIL3Q16649 462 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 LY6KQ17RY6 165 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 BMT2Q1RMZ1 405 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CCDC60Q8IWA6 550 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-213ENST00000557765 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 DNAJC19Q96DA6 116 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 MTRQ99707 1265 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 TSEN34Q9BSV6 310 aaKnown RBP11.65□□□□□ -0.54
GABRB3-213ENST00000557765 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
GABRB3-213ENST00000557765 TMEM206Q9H813 350 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 ATP6V0A4Q9HBG4 840 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 PANK4Q9NVE7 773 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 RWDD2AQ9UIY3 292 aa11.65□□□□□ -0.54
GABRB3-213ENST00000557765 MYMKA6NI61 221 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 E9PMD0 336 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 H3BRB1 525 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 DDX39AO00148 427 aaKnown RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 KLRC4O43908 158 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 ADCY3O60266 1144 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 PEX10O60683 326 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 MAFO75444 373 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 FAM13AO94988 1023 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 GNA14O95837 355 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 F2P00734 622 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 SMPD1P17405 629 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 EFNA5P52803 228 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 PRKCZQ05513 592 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 ENPEPQ07075 957 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 CUL4BQ13620 913 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 GIT2Q14161 759 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 EDRF1Q3B7T1 1238 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 IER5Q5VY09 327 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 ANO5Q75V66 913 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 TLK2Q86UE8 772 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 OR6J1Q8NGC5 347 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 IFT74Q96LB3 600 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
GABRB3-213ENST00000557765 MAN1B1Q9UKM7 699 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 EXOC7Q9UPT5 735 aa11.64□□□□□ -0.55
GABRB3-213ENST00000557765 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 ARIH2O95376 493 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 LGALS2P05162 132 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 MMP3P08254 477 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 PLS3P13797 630 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 RPL13P26373 211 aaKnown RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 DMP1Q13316 513 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 ECM1Q16610 540 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 RNF180Q86T96 592 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 MYOCDQ8IZQ8 938 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms