RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CYP2C9P11712 490 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 CKBP12277 381 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 UGCGQ16739 394 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 TRIM71Q2Q1W2 868 aaKnown RBP15.3■□□□□ 0.04
SHMT2-234ENST00000557703 FAM26DQ5JW98 314 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 ODR4Q5SWX8 454 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 HYIQ5T013 277 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 ANO5Q75V66 913 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 LINC00301Q8NCQ3 95 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 SLC7A3Q8WY07 619 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 RGL1Q9NZL6 768 aa15.3■□□□□ 0.04
SHMT2-234ENST00000557703 IGKV6-21A0A0C4DH24 114 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 VWA3AA6NCI4 1184 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 MAFO75444 373 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 DGAT1O75907 488 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 C22orf31O95567 290 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 IQCF3P0C7M6 154 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 DDIT3P35638 169 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 UBA7P41226 1012 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 FPGSQ05932 587 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 KRI1Q8N9T8 703 aaKnown RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 ZNF579Q8NAF0 562 aaKnown RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 CCDC43Q96MW1 224 aaKnown RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 GDF15Q99988 308 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-234ENST00000557703 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
SHMT2-234ENST00000557703 RSPH10B2B2RC85 870 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 SPTLC2O15270 562 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 ASAP2O43150 1006 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 EFCAB14O75071 495 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 RSPH10BP0C881 870 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 TXLNAP40222 546 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 THPOP40225 353 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 KRT85P78386 507 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 ZNF200P98182 395 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 HIC1Q14526 733 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 STK38Q15208 465 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 PSRC1Q6PGN9 363 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 BADQ92934 168 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CCSER1Q9C0I3 900 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 KCND2Q9NZV8 630 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
SHMT2-234ENST00000557703 CXCL10P02778 98 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 SYN1P17600 705 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 MAGEA10P43363 369 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-234ENST00000557703 RARRES1P49788 294 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 IGBP1P78318 339 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 IL17AQ16552 155 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 EFCAB12Q6NXP0 572 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 LINC01465Q8N7H1 131 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 MCPH1Q8NEM0 835 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 TIPINQ9BVW5 301 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.04
SHMT2-234ENST00000557703 LOXHD1Q8IVV2 1947 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 MED24O75448 989 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 ACTN1P12814 892 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 ITGB8P26012 769 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 CYP2C18P33260 490 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 POLGP54098 1239 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 MRPS6P82932 125 aaKnown RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 POU5F1BQ06416 359 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 PKP1Q13835 747 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 MXD4Q14582 209 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 MTERF2Q49AM1 385 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 ZNF618Q5T7W0 954 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 FAM173BQ6P4H8 233 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 METTL13Q8N6R0 699 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 DNAJB3Q8WWF6 145 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 APBB2Q92870 758 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 PPP1R12CQ9BZL4 782 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 INO80BQ9C086 356 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 WNT8AQ9H1J5 351 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 WRAP73Q9P2S5 460 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-234ENST00000557703 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 FBXO2Q9UK22 296 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms