RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 B3GALT1Q9Y5Z6 326 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 PTCH2Q9Y6C5 1203 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 SLC12A8A0AV02 714 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 RASSF10A6NK89 507 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 MATN2O00339 956 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 CR2P20023 1033 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 TACR2P21452 398 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 TRIM68Q6AZZ1 485 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 CRIP3Q6Q6R5 217 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 OTOP2Q7RTS6 562 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 LILRB2Q8N423 598 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 WDR48Q8TAF3 677 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 SORCS2Q96PQ0 1159 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 DPYSL5Q9BPU6 564 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 ZNF747Q9BV97 191 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 KIAA1683Q9H0B3 1180 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 OR10A5Q9H207 317 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 TRIM39Q9HCM9 518 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 SRRDQ9UH36 339 aa6.46□□□□□ -1.38
VRK1-207ENST00000557352 PRAMEF22A3QJZ6 481 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 FOXP2O15409 715 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 NPTXRO95502 500 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 AMHP03971 560 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 SDHAP31040 664 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 NFYCQ13952 458 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 SF3A1Q15459 793 aaKnown RBP6.45□□□□□ -1.38
VRK1-207ENST00000557352 TMEM200BQ69YZ2 307 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 IGSF22Q8N9C0 903 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 HIPK4Q8NE63 616 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 ADOQ96SZ5 270 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 VPS11Q9H270 941 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 NCOA5Q9HCD5 579 aaKnown RBP6.45□□□□□ -1.38
VRK1-207ENST00000557352 ASB1Q9Y576 335 aa6.45□□□□□ -1.38
VRK1-207ENST00000557352 A0A0G2JNJ9 132 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 ARHGAP6O43182 974 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 CDC14BO60729 498 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 RAD17O75943 681 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 COMTP21964 271 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 MOGSQ13724 837 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 TMEM132BQ14DG7 1078 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 PCOLCEQ15113 449 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 PRKD1Q15139 912 aaPredicted RBP6.44□□□□□ -1.38
VRK1-207ENST00000557352 TMEM177Q53S58 311 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 CATSPEREQ5SY80 951 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 AGBL4Q5VU57 503 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 USP30Q70CQ3 517 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 FILIP1Q7Z7B0 1213 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 C2orf69Q8N8R5 385 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 CFHR4Q92496 578 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 C12orf65Q9H3J6 166 aaKnown RBP6.44□□□□□ -1.38
VRK1-207ENST00000557352 Q9UFV3 132 aa6.44□□□□□ -1.38
VRK1-207ENST00000557352 GOLGA6L22H0YM25 854 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 ZBTB48P10074 688 aaPredicted RBP6.43□□□□□ -1.38
VRK1-207ENST00000557352 ACVRL1P37023 503 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 MRE11P49959 708 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 IRF9Q00978 393 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 DUSP8Q13202 625 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 GRAMD4Q6IC98 578 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 Q6ZSN1 163 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 OTOP1Q7RTM1 612 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 EDAQ92838 391 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 DNAJC2Q99543 621 aaKnown RBP6.43□□□□□ -1.38
VRK1-207ENST00000557352 SLC30A1Q9Y6M5 507 aa6.43□□□□□ -1.38
VRK1-207ENST00000557352 PLD2O14939 933 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 HIP1RO75146 1068 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 SLPIP03973 132 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 MEOX1P50221 254 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 OR14A2Q96R54 314 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 PLA2G12BQ9BX93 195 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 OSBPL2Q9H1P3 480 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
VRK1-207ENST00000557352 PUF60Q9UHX1 559 aaKnown RBP6.42□□□□□ -1.38
VRK1-207ENST00000557352 RAPGEF3O95398 923 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
VRK1-207ENST00000557352 GDF5P43026 501 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 STAT5BP51692 787 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 POLNQ7Z5Q5 900 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 RTKN2Q8IZC4 609 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 CALML6Q8TD86 181 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 ERCC4Q92889 916 aaPredicted RBP6.41□□□□□ -1.38
VRK1-207ENST00000557352 FOXRED1Q96CU9 486 aaPredicted RBP6.41□□□□□ -1.38
VRK1-207ENST00000557352 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 BOCQ9BWV1 1114 aa6.41□□□□□ -1.38
VRK1-207ENST00000557352 CDK11AQ9UQ88 783 aaPredicted RBP6.41□□□□□ -1.38
VRK1-207ENST00000557352 FZD7O75084 574 aa6.4□□□□□ -1.38
VRK1-207ENST00000557352 APEX1P27695 318 aaKnown RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 MECP2P51608 486 aaKnown RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 CC2D1AQ6P1N0 951 aaPredicted RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 RTN4RL1Q86UN2 441 aaPredicted RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 BCL6BQ8N143 479 aaPredicted RBP6.4□□□□□ -1.38
VRK1-207ENST00000557352 MSL2Q9HCI7 577 aa6.4□□□□□ -1.38
VRK1-207ENST00000557352 M0R2C6 588 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 SUV39H1O43463 412 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 MAFO75444 373 aaPredicted RBP6.39□□□□□ -1.39
VRK1-207ENST00000557352 KRT37O76014 449 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 HGFACQ04756 655 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 ARHGAP44Q17R89 818 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 FNDC3BQ53EP0 1204 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms