RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 KCNMB3Q9NPA1 279 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 DISC1Q9NRI5 854 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
SHMT2-224ENST00000556737 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 EVPLQ92817 2033 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 LPXNO60711 386 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 OATP04181 439 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 XBP1P17861 261 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 CD52P31358 61 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 SFNP31947 248 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
SHMT2-224ENST00000556737 JAK3P52333 1124 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 LETM2Q2VYF4 491 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 PIK3AP1Q6ZUJ8 805 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 RDM1Q8NG50 284 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 CELF4Q9BZC1 486 aaKnown RBP11.66□□□□□ -0.54
SHMT2-224ENST00000556737 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
SHMT2-224ENST00000556737 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 VAV3Q9UKW4 847 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
SHMT2-224ENST00000556737 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 SQORQ9Y6N5 450 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 A0A0C4DFX4 3053 aa11.66□□□□□ -0.54
SHMT2-224ENST00000556737 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 WNT7AO00755 349 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 STBD1O95210 358 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 MMP1P03956 469 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
SHMT2-224ENST00000556737 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-224ENST00000556737 KRT2P35908 639 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 ANP32AP39687 249 aaKnown RBP11.65□□□□□ -0.54
SHMT2-224ENST00000556737 ERVK-21P61565 698 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 IER5Q5VY09 327 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 PPP4R3AQ6IN85 833 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 GDPD5Q8WTR4 605 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 HAS1Q92839 578 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 FAM167AQ96KS9 214 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 MTCH2Q9Y6C9 303 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 TTC3P53804 2025 aa11.65□□□□□ -0.54
SHMT2-224ENST00000556737 EML1O00423 815 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 LINC00271P0C7V0 271 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 IGFBP4P22692 258 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 FOSBP53539 338 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 GRB10Q13322 594 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
SHMT2-224ENST00000556737 KRT40Q6A162 431 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 NME8Q8N427 588 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 TGS1Q96RS0 853 aaKnown RBP11.64□□□□□ -0.55
SHMT2-224ENST00000556737 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 TMX1Q9H3N1 280 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 ERVK-5Q9HDB9 667 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 PADI3Q9ULW8 664 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 INSL6Q9Y581 213 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 MYO9BQ13459 2157 aa11.64□□□□□ -0.55
SHMT2-224ENST00000556737 TMEM150BA6NC51 233 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 BTBD18B2RXH4 712 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 M0QZ92 97 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 ENPP3O14638 875 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 TBX3O15119 743 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 CCNT1O60563 726 aaKnown RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 GPR32O75388 356 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 UPP2O95045 317 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 VTNP04004 478 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 CLCN3P51790 818 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 PAK2Q13177 524 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 TMEM266Q2M3C6 531 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 RTN4RL1Q86UN2 441 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 DIS3L2Q8IYB7 885 aaKnown RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 LRRC71Q8N4P6 559 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 FAM20AQ96MK3 541 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 YME1L1Q96TA2 773 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 WRAP73Q9P2S5 460 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 MTUS1Q9ULD2 1270 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 CEP131Q9UPN4 1083 aa11.63□□□□□ -0.55
SHMT2-224ENST00000556737 NOC2LQ9Y3T9 749 aaKnown RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 PRRC2BQ5JSZ5 2229 aaKnown RBP11.63□□□□□ -0.55
SHMT2-224ENST00000556737 ADGRA3Q8IWK6 1321 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 MGEA5O60502 916 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 FAM228AQ86W67 206 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms