RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CLCN3P51790 818 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
SNX6-208ENST00000556712 IKBKEQ14164 716 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 GRIN2CQ14957 1233 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 SAFBQ15424 915 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNX6-208ENST00000556712 RAB30Q15771 203 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 ZNF484Q5JVG2 852 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 FBXO47Q5MNV8 452 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 NCAPH2Q6IBW4 605 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 SPRED2Q7Z698 418 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 FBXO18Q8NFZ0 1043 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 SEPT8Q92599 483 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 FAM167AQ96KS9 214 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
SNX6-208ENST00000556712 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
SNX6-208ENST00000556712 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 PCDHA11Q9Y5I1 949 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.67□□□□□ -0.54
SNX6-208ENST00000556712 LCHNA4D1U4 455 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 MARCH6O60337 910 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 NEMFO60524 1076 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 VTNP04004 478 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 CD52P31358 61 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 MCM7P33993 719 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 SPIRE1Q08AE8 756 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 NBR1Q14596 966 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 CALCRLQ16602 461 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 MTERF2Q49AM1 385 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 MYOCDQ8IZQ8 938 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 METTL13Q8N6R0 699 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 RDM1Q8NG50 284 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
SNX6-208ENST00000556712 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
SNX6-208ENST00000556712 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 AGO3Q9H9G7 860 aaKnown RBP11.67□□□□□ -0.54
SNX6-208ENST00000556712 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
SNX6-208ENST00000556712 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
SNX6-208ENST00000556712 M0QZ92 97 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 TBX3O15119 743 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 TLL1O43897 1013 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 STBD1O95210 358 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 GJB2P29033 226 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 CYP4A11Q02928 519 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
SNX6-208ENST00000556712 KIZQ2M2Z5 673 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 PHOSPHO2Q8TCD6 241 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 LINC01599Q8WXQ3 324 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 DYDC2Q96IM9 177 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 OSMRQ99650 979 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
SNX6-208ENST00000556712 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 CEP131Q9UPN4 1083 aa11.66□□□□□ -0.54
SNX6-208ENST00000556712 COL4A6Q14031 1691 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 KIAA1671Q9BY89 1806 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 EPOPA6NHQ4 379 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 POTEMA6NI47 508 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 EFCAB14O75071 495 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 GJB5O95377 273 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 BAG4O95429 457 aaKnown RBP11.65□□□□□ -0.54
SNX6-208ENST00000556712 AMHP03971 560 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 FOSL2P15408 326 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 TXKP42681 527 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 PSMC5P62195 406 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 TBC1D8BQ0IIM8 1120 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 DRP2Q13474 957 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 CTTNQ14247 550 aaKnown RBP11.65□□□□□ -0.54
SNX6-208ENST00000556712 ZNF174Q15697 407 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 IER5Q5VY09 327 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 EFCAB12Q6NXP0 572 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 APBB2Q92870 758 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 LXNQ9BS40 222 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 CELF4Q9BZC1 486 aaKnown RBP11.65□□□□□ -0.54
SNX6-208ENST00000556712 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
SNX6-208ENST00000556712 SUGCTQ9HAC7 445 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 NRBP2Q9NSY0 501 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
SNX6-208ENST00000556712 AKT3Q9Y243 479 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 STXBP5LQ9Y2K9 1186 aa11.65□□□□□ -0.54
SNX6-208ENST00000556712 KDM3AQ9Y4C1 1321 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms