RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TMEM260Q9NX78 707 aa14.46□□□□□ -0.09
SHMT2-223ENST00000556689 GINS2Q9Y248 185 aa14.46□□□□□ -0.09
SHMT2-223ENST00000556689 TECTAO75443 2155 aa14.46□□□□□ -0.1
SHMT2-223ENST00000556689 GPR182O15218 404 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 SGSM2O43147 1006 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 HBP1O60381 514 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 MGEA5O60502 916 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 ATG7O95352 703 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 ARP10275 920 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 RXRAP19793 462 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 PDE4AP27815 886 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 ERVFC1P60507 584 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 RBM10P98175 930 aaKnown RBP14.45□□□□□ -0.1
SHMT2-223ENST00000556689 TMEM184AQ6ZMB5 413 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 HEATR3Q7Z4Q2 680 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 THNSL1Q8IYQ7 743 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 CDHR5Q9HBB8 845 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 TYW1Q9NV66 732 aaKnown RBP14.45□□□□□ -0.1
SHMT2-223ENST00000556689 PUF60Q9UHX1 559 aaKnown RBP14.45□□□□□ -0.1
SHMT2-223ENST00000556689 NOC2LQ9Y3T9 749 aaKnown RBP14.45□□□□□ -0.1
SHMT2-223ENST00000556689 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
SHMT2-223ENST00000556689 SLC12A7Q9Y666 1083 aa14.45□□□□□ -0.1
SHMT2-223ENST00000556689 ZNF318Q5VUA4 2279 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 C9IYK1 514 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-223ENST00000556689 SRGAP2BP0DMP2 458 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 AVPR2P30518 371 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 LIFRP42702 1097 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 CEP55Q53EZ4 464 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 KIAA0319LQ8IZA0 1049 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 FANCBQ8NB91 859 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 COLGALT1Q8NBJ5 622 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 VN1R2Q8NFZ6 395 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 ASIC4Q96FT7 647 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 SNX27Q96L92 541 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 S1PR5Q9H228 398 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 ATP6V0A4Q9HBG4 840 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 AGO4Q9HCK5 861 aaKnown RBP14.44□□□□□ -0.1
SHMT2-223ENST00000556689 ST3GAL5Q9UNP4 418 aa14.44□□□□□ -0.1
SHMT2-223ENST00000556689 ATG2AQ2TAZ0 1938 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 USP34Q70CQ2 3546 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 IGKV6D-21A0A0A0MT36 114 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 MEIS1O00470 390 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 FSCN2O14926 492 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 FOSP01100 380 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-223ENST00000556689 TECP42680 631 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 FAM189BP81408 668 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 ITGB3BPQ13352 177 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-223ENST00000556689 PTPN21Q16825 1174 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 ZNF484Q5JVG2 852 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 FAM160B1Q5W0V3 765 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 ANKRD54Q6NXT1 300 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 TEX2Q8IWB9 1127 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
SHMT2-223ENST00000556689 BACH1O14867 736 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 HOXB8P17481 243 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 LAG3P18627 525 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 ZNF76P36508 570 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 CRYBB1P53674 252 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 VCPP55072 806 aaKnown RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 PLCB3Q01970 1234 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 KCNC3Q14003 757 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 PLPP4Q5VZY2 271 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 PDXDC2PQ6P474 469 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 ABHD15Q6UXT9 468 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 SYNE3Q6ZMZ3 975 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 TMTC3Q6ZXV5 915 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 RAB11FIP4Q86YS3 637 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 RASGRP4Q8TDF6 673 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 TMEM40Q8WWA1 233 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 ATOH1Q92858 354 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 CWH43Q9H720 699 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 ELAC1Q9H777 363 aaKnown RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 NGRNQ9NPE2 291 aaKnown RBP14.42□□□□□ -0.1
SHMT2-223ENST00000556689 RIC8AQ9NPQ8 531 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 TMEM161AQ9NX61 479 aa14.42□□□□□ -0.1
SHMT2-223ENST00000556689 GFRA3O60609 400 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 FGFR1P11362 822 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 NAPAP54920 295 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 KRT17Q04695 432 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 KIZQ2M2Z5 673 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 SYCE2Q6PIF2 218 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 ZBTB33Q86T24 672 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 PGBD1Q96JS3 809 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 RIPOR3Q96MK2 946 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 TCF25Q9BQ70 676 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 ENTPD7Q9NQZ7 604 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 ZNF302Q9NR11 478 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 FAM86C1Q9NVL1 165 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 HCSTQ9UBK5 93 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 COL1A2P08123 1366 aa14.41□□□□□ -0.1
SHMT2-223ENST00000556689 DDX39AO00148 427 aaKnown RBP14.4□□□□□ -0.1
SHMT2-223ENST00000556689 CCNE2O96020 404 aa14.4□□□□□ -0.1
SHMT2-223ENST00000556689 NUBP1P53384 320 aa14.4□□□□□ -0.1
SHMT2-223ENST00000556689 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
SHMT2-223ENST00000556689 SWSAP1Q6NVH7 229 aa14.4□□□□□ -0.1
SHMT2-223ENST00000556689 MIS18BP1Q6P0N0 1132 aa14.4□□□□□ -0.1
SHMT2-223ENST00000556689 LLGL2Q6P1M3 1020 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms