RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX6-207ENST00000556303 NPY5RQ15761 445 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 FAM117BQ6P1L5 589 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 KRT25Q7Z3Z0 450 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 CKAP2LQ8IYA6 745 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 KIAA0319LQ8IZA0 1049 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 SLC5A5Q92911 643 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 MBOAT7Q96N66 472 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 NAP1L4Q99733 375 aaKnown RBP14.25□□□□□ -0.13
SNX6-207ENST00000556303 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 TEKT3Q9BXF9 490 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
SNX6-207ENST00000556303 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 ZBTB42B2RXF5 422 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 UPP2O95045 317 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 TMOD1P28289 359 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 PAK2Q13177 524 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 PTPROQ16827 1216 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 LRCH2Q5VUJ6 765 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 TRAPPC12Q8WVT3 735 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
SNX6-207ENST00000556303 GABBR1Q9UBS5 961 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 PADI3Q9ULW8 664 aa14.24□□□□□ -0.13
SNX6-207ENST00000556303 SIP14410 1827 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 C5orf67F2Z3F1 127 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 H3BNC9 293 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 GPR182O15218 404 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 PSMD10O75832 226 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 C22orf31O95567 290 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 STAG3L1P0CL83 205 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
SNX6-207ENST00000556303 CD52P31358 61 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 CRYBB1P53674 252 aaPredicted RBP14.23□□□□□ -0.13
SNX6-207ENST00000556303 CDC42EP1Q00587 391 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 EPC2Q52LR7 807 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 B3GNT9Q6UX72 402 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 CRIPAKQ8N1N5 446 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 MICALL1Q8N3F8 863 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 CLP1Q92989 425 aaKnown RBP14.23□□□□□ -0.13
SNX6-207ENST00000556303 ZNF689Q96CS4 500 aaPredicted RBP14.23□□□□□ -0.13
SNX6-207ENST00000556303 RC3H2Q9HBD1 1191 aaKnown RBP14.23□□□□□ -0.13
SNX6-207ENST00000556303 PRDM6Q9NQX0 595 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 EVPLQ92817 2033 aa14.23□□□□□ -0.13
SNX6-207ENST00000556303 CCDC194A0A1B0GVG4 234 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 DGKIO75912 1065 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 OATP04181 439 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 AK2P54819 239 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
SNX6-207ENST00000556303 SPRED2Q7Z698 418 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 ETNPPLQ8TBG4 499 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 HLA-CQ95604 372 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 ZBTB10Q96DT7 871 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 MRPL38Q96DV4 380 aaKnown RBP14.22□□□□□ -0.13
SNX6-207ENST00000556303 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 C17orf80Q9BSJ5 609 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 C1orf112Q9NSG2 853 aa14.22□□□□□ -0.13
SNX6-207ENST00000556303 ORC3Q9UBD5 711 aaPredicted RBP14.22□□□□□ -0.13
SNX6-207ENST00000556303 ADGRA3Q8IWK6 1321 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 TBX3O15119 743 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 RPS6KA5O75582 802 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 TMEM62Q0P6H9 643 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 NEK8Q86SG6 692 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 RTN4RL1Q86UN2 441 aaPredicted RBP14.21□□□□□ -0.13
SNX6-207ENST00000556303 LINC01465Q8N7H1 131 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 NIFKQ9BYG3 293 aaKnown RBP14.21□□□□□ -0.13
SNX6-207ENST00000556303 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 ERVK-5Q9HDB9 667 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 DDX25Q9UHL0 483 aaKnown RBP14.21□□□□□ -0.13
SNX6-207ENST00000556303 MTUS1Q9ULD2 1270 aa14.21□□□□□ -0.13
SNX6-207ENST00000556303 WDR81Q562E7 1941 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 NCK2O43639 380 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 ZNF862O60290 1169 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 DKC1O60832 514 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX6-207ENST00000556303 GPR32O75388 356 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 TDP2O95551 362 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 BMPR1AP36894 532 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
SNX6-207ENST00000556303 PRKCEQ02156 737 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 INF2Q27J81 1249 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 TIGD5Q53EQ6 642 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 XKR3Q5GH77 459 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 EFCAB12Q6NXP0 572 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 MIER3Q7Z3K6 550 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 CMTR2Q8IYT2 770 aaKnown RBP14.2□□□□□ -0.14
SNX6-207ENST00000556303 METTL13Q8N6R0 699 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 LINC01599Q8WXQ3 324 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 GTF3C6Q969F1 213 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 UIMC1Q96RL1 719 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms